Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq6636 95.1 8e-15 >seq6636 Length=1250 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 70379 CCACCATGTCATACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTA 70438 ||||| || |||| | |||||||||||| | | | | ||| || ||||| || || Sbjct 377 CCACCTTGCCATATATTATTCCAATTCTATATAGCTAACAATAAACTATCTTGTCAAGTA 318 Query 70439 TATCAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTA 70498 |||||| | ||||| || || || | ||||| || || ||||||||| ||||| ||| Sbjct 317 TATCAAAGAAGTGCCGATATATTTTTAGGTGTTCCTTTTAATATTGCAAGCTATGCATTA 258 Query 70499 CTTACACATCTTATTGCTGCTGAGTGTGGGTTAGGTGTTGGTGAGTTTGTTTGGACTGGT 70558 |||||| | | || ||| | ||||| |||| | | ||||| || | ||||| || Sbjct 257 CTTACAAACATGATAGCTCAACAATGTGGATTAGATATAGGTGAATTAATATGGACAGGA 198 Query 70559 GGTGATATCCATGTGTA 70575 || ||| ||||| || Sbjct 197 GGAGATTGTCATGTATA 181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335522164908364