Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5572 168 1e-36 seq4920 168 1e-36 seq4861 168 1e-36 seq7561 152 1e-31 seq7588 118 2e-21 seq2261 118 2e-21 seq8084 116 8e-21 seq7142 116 8e-21 seq6878 116 8e-21 seq5725 116 8e-21 seq2337 116 8e-21 seq2156 116 8e-21 seq5537 91.5 3e-13 >seq5572 Length=1533 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || ||||| || || || || | |||| || || || ||||||||||| || Sbjct 879 ACCGCCGCGGAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGC 820 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || || ||||| | || || ||||| ||| Sbjct 819 GAGCGTGCGGCCCTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGG 760 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | ||||| ||||| || ||||| Sbjct 759 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGCTCGCCTCGAC 700 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAt 283099 ||||| | ||||||||| || |||| |||||| ||||| |||||||| Sbjct 699 CTCGAGGGCGATCGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 652 >seq4920 Length=845 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||||||| || ||||| || | |||| || || |||||||||||||| || Sbjct 531 ACCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 590 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || |||||||||| || || ||||| || Sbjct 591 GAGCGTGCGGCCCTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGG 650 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | ||||| ||||| || || || Sbjct 651 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGCTCTCGATCGTGTCGCTCGCCTCCAC 710 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAt 283099 || || | ||||||||| || |||| ||||| ||||| || ||||| Sbjct 711 CTCCAGGGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 758 >seq4861 Length=995 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || |||||||| || ||||| || | |||| || || |||||||||||||| || Sbjct 459 ACCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 400 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||| ||||| || || || || |||||||||| || || ||||| || Sbjct 399 GAGCGTGCGGCCCTCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGG 340 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || ||| | ||||| ||||| || || || Sbjct 339 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCAC 280 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAt 283099 || || | ||||||||| || |||| ||||| ||||| || ||||| Sbjct 279 CTCCAGGGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATTTGCAT 232 >seq7561 Length=2662 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| || || ||||| || | ||| || || |||||||||||||| || Sbjct 2652 CCGCCGCGCAGACGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 2593 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| ||||| ||||| || || || || |||||||||| || || ||||| || Sbjct 2592 AGCGTACGGCCCTCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 2533 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| || || || Sbjct 2532 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 2473 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAt 283099 || || | ||||||||| || |||| ||||| || || |||||||| Sbjct 2472 TCCAGGGCGATCGTCTTGCCGGTCAGCGTCTTCACAAAGATCTGCAT 2426 >seq7588 Length=1600 Score = 118 bits (130), Expect = 2e-21 Identities = 305/458 (67%), Gaps = 14/458 (3%) Strand=Plus/Plus Query 229956 GAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGCGCC 230015 ||||| ||| ||| | | | ||| ||||| || | |||||||| |||||| || Sbjct 682 GAGCGGCTCATCGGCTTCGCGGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCTCC 741 Query 230016 ATCTTTTGGCTACGCAACAAG---GGCGTCATGCCCGGGCTCGGTCTGTCGAACGAATTC 230072 ||||| ||||| ||| ||| ||||| |||||||| ||| | ||||| || Sbjct 742 ATCTTCTGGCT---CAAGAAGCGCGGCGTGATGCCCGGCCTCACCTTCAGCAACGAGCTC 798 Query 230073 ATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGGTCTTGTATTCGA-AGCTAAA 230131 ||| | ||||| || || ||| | | | || || | || | | | | ||||| | Sbjct 799 ATCTCGCGCGACGAGGGCCTGCAC-ACCGACTTCGCCTGC-CTGCTGTACAACAGCTACA 856 Query 230132 TAA----CAAACTACCTTTCGAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAAATG 230187 | | ||| || || ||| ||| | ||| |||| || | || | | | Sbjct 857 TCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGACATCATCACCGACGCCGTCGTCATCG 916 Query 230188 AAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCA 230247 | ||||||||||| |||||||| | || || || ||||||||||| || || |||| Sbjct 917 AGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTCA 976 Query 230248 TGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAG 230307 || | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 977 TGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAGC 1036 Query 230308 TGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTA 230367 || ||||||| |||||||||| || |||||| | || || ||| || || || | Sbjct 1037 ACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACCA 1096 Query 230368 ACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 |||||||||| ||| ||| ||| || || |||||| Sbjct 1097 ACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 1134 >seq2261 Length=1262 Score = 118 bits (130), Expect = 2e-21 Identities = 305/458 (67%), Gaps = 14/458 (3%) Strand=Plus/Plus Query 229956 GAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTCTGCGCC 230015 ||||| ||| ||| | | | ||| ||||| || | |||||||| |||||| || Sbjct 647 GAGCGGCTCATCGGCTTCGCGGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCTCC 706 Query 230016 ATCTTTTGGCTACGCAACAAG---GGCGTCATGCCCGGGCTCGGTCTGTCGAACGAATTC 230072 ||||| ||||| ||| ||| ||||| |||||||| ||| | ||||| || Sbjct 707 ATCTTCTGGCT---CAAGAAGCGCGGCGTGATGCCCGGCCTCACCTTCAGCAACGAGCTC 763 Query 230073 ATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGGTCTTGTATTCGA-AGCTAAA 230131 ||| | ||||| || || ||| | | | || || | || | | | | ||||| | Sbjct 764 ATCTCGCGCGACGAGGGCCTGCAC-ACCGACTTCGCCTGC-CTGCTGTACAACAGCTACA 821 Query 230132 TAA----CAAACTACCTTTCGAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAAATG 230187 | | ||| || || ||| ||| | ||| |||| || | || | | | Sbjct 822 TCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGACATCATCACCGACGCCGTCGTCATCG 881 Query 230188 AAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCA 230247 | ||||||||||| |||||||| | || || || ||||||||||| || || |||| Sbjct 882 AGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTCA 941 Query 230248 TGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAG 230307 || | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 942 TGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAGC 1001 Query 230308 TGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTA 230367 || ||||||| |||||||||| || |||||| | || || ||| || || || | Sbjct 1002 ACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACCA 1061 Query 230368 ACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 |||||||||| ||| ||| ||| || || |||||| Sbjct 1062 ACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 1099 >seq8084 Length=1321 Score = 116 bits (128), Expect = 8e-21 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||||| |||||||| | || || || ||||||||||| || || ||| Sbjct 668 GAGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTC 609 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 608 ATGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAG 549 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||||| |||||||||| || |||||| | || || ||| || || || Sbjct 548 CACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACC 489 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||||||| ||| ||| ||| || || |||||| Sbjct 488 AACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 450 >seq7142 Length=1074 Score = 116 bits (128), Expect = 8e-21 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||||| |||||||| | || || || ||||||||||| || || ||| Sbjct 583 GAGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTC 524 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 523 ATGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAG 464 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||||| |||||||||| || |||||| | || || ||| || || || Sbjct 463 CACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACC 404 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||||||| ||| ||| ||| || || |||||| Sbjct 403 AACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 365 >seq6878 Length=4371 Score = 116 bits (128), Expect = 8e-21 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||||| |||||||| | || || || ||||||||||| || || ||| Sbjct 2316 GAGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTC 2375 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 2376 ATGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAG 2435 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||||| |||||||||| || |||||| | || || ||| || || || Sbjct 2436 CACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACC 2495 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||||||| ||| ||| ||| || || |||||| Sbjct 2496 AACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 2534 >seq5725 Length=2234 Score = 116 bits (128), Expect = 8e-21 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||||| |||||||| | || || || ||||||||||| || || ||| Sbjct 1322 GAGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTC 1381 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 1382 ATGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAG 1441 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||||| |||||||||| || |||||| | || || ||| || || || Sbjct 1442 CACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACC 1501 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||||||| ||| ||| ||| || || |||||| Sbjct 1502 AACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 1540 >seq2337 Length=1647 Score = 116 bits (128), Expect = 8e-21 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||||| |||||||| | || || || ||||||||||| || || ||| Sbjct 615 GAGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTC 556 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 555 ATGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAG 496 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||||| |||||||||| || |||||| | || || ||| || || || Sbjct 495 CACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACC 436 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||||||| ||| ||| ||| || || |||||| Sbjct 435 AACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 397 >seq2156 Length=1716 Score = 116 bits (128), Expect = 8e-21 Identities = 158/219 (72%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 230187 GAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTC 230246 || ||||||||||| |||||||| | || || || ||||||||||| || || ||| Sbjct 1183 GAGAAGGAGTTCATCTGCGACGCGCTGCCCGTGCGCCTCATCGGCATGAACGCCGACCTC 1242 Query 230247 ATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAA 230306 ||| | || || ||||| ||||| || || || | ||||| |||| || ||||| Sbjct 1243 ATGAGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTGTCGCTGGGCCTGGAGAAG 1302 Query 230307 GTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACT 230366 || ||||||| |||||||||| || |||||| | || || ||| || || || Sbjct 1303 CACTACAACTCCACCAACCCCTTCGACTTCATGGAGATGATCTCCCTCACCGGCAAGACC 1362 Query 230367 AACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404 ||||||||||| ||| ||| ||| || || |||||| Sbjct 1363 AACTTCTTCGAGAAGAAGGTCGCCGAGTACCAGAAGGCC 1401 >seq5537 Length=4161 Score = 91.5 bits (100), Expect = 3e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 273774 AGTTTCGTGAAAATGTACC-TGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACC 273832 || || ||||| ||||| | |||| | || ||||| || || ||| | | ||| || Sbjct 1785 AGCTTTGTGAAGATGTAGCGTGGCGCG-GCGTGGTCGTTACCCAGCTGCTGGCGCGAGCC 1843 Query 273833 AAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCAT 273892 ||||| ||||| |||| ||| ||| |||||||||| ||| | | | ||| ||||| Sbjct 1844 GAACTGGCCCTCTGGCACGAGCAGGTTGATGTTGTTGCCGCCGGTGAAGTTCTGCGCCAT 1903 Query 273893 ATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTG 273931 |||||||| ||| |||| || || | |||||||||||| Sbjct 1904 CTTCACGATCGTCTCCTGGAGCGACATCTCGCCGTGGTG 1942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046567910288888