Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq518 251 8e-62 >seq518 Length=13848 Score = 251 bits (278), Expect = 8e-62 Identities = 427/613 (70%), Gaps = 12/613 (2%) Strand=Plus/Plus Query 145668 GGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGAC 145727 ||| ||||| ||| ||| | ||||||||||| ||| ||||||||||| ||||| Sbjct 5412 GGTGAGCTGCTGCTGCAGCGCGTCCACGTGGTTCTTGTACACGTGCGCGTCGCCCAGCGT 5471 Query 145728 GTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGA 145787 |||||||| |||||||||| || ||||| | ||||| | | ||||| | || Sbjct 5472 GTGGATGAGCTCCCCGGGCTTCAGCCCCGTCGCCTTGGCGATGAGGATAGTCAGGAAGGC 5531 Query 145788 GTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTG 145847 ||| ||| |||||||||||||| || || |||||||| | ||||||||||||| Sbjct 5532 GTACGAGGCGATGTTGAAGGGCACACCGAGGCCCATGTCGCAGCTGCGCTGGTACAGCAT 5591 Query 145848 GCAGGAGAGCTCCCCGCCCG-------CCACGTAGAACTGGCACAGGAGGTGGCAGGGCG 145900 |||| |||| || || | |||||||||||||| ||||||||||| |||| Sbjct 5592 GCAGCTCAGCT-CCTGCGTGTTGGGGTTCACGTAGAACTGGCCGAGGAGGTGGCACGGCG 5650 Query 145901 GCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTG-CTC 145959 |||| ||||| | || | ||||||||||| || |||| || |||| | | | | Sbjct 5651 GCAGCGCCATCTTGTCAAGCGCGGCCGGGTTCCACGCCGTGAAGAGCAGCCGGCGGTCGC 5710 Query 145960 TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 | ||| ||| |||||| | | | | | | | ||| |||||| ||||||| || | Sbjct 5711 T-GGGATTCGTCTTGAGCGTCTCGACGATGCGCTTGATCTGGTCGACGCCCTTGCCGTCG 5769 Query 146020 TAATCTGTC-TTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGAC 146078 || | |||| ||| || | ||| |||| |||||||| | ||||||||| |||||||| Sbjct 5770 TAGT-TGTCGTTGAAGGACGTGTAGTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTAGAC 5828 Query 146079 GGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGA 146138 ||||||||||||| || |||| || ||| | | |||||||| | ||| Sbjct 5829 GGGCCCCAGGTCCATCTCTTCGTAGTGCGTGAGGCCGCGGCTGTCGAGGAAGGCGCGGCT 5888 Query 146139 CCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCC 146198 |||||| |||||||||| | || |||| | | | |||| || | || || ||| Sbjct 5889 GCCGTTGTCGTCCCAGATGTGGATGCCCTTGTCCGCGAGCAGCTTCGCGTTGGTCTCCCC 5948 Query 146199 CCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258 | | |||||||| ||||| || || || | ||||||||| | ||| || || || Sbjct 5949 GCGCAGGAACCAGATGAGCTCCTCCGACACGCCGCGCCAGAAGACGCGCTTCGTCGTGAG 6008 Query 146259 CAGGGGGAACTGG 146271 || || | |||| Sbjct 6009 GAGCGGCAGCTGG 6021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590054657368080