Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq36 84.2 2e-11 >seq36 Length=60674 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | || ||| || |||||||| || ||||| || || || || || | Sbjct 7264 CCGCCGCGGAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGAATGTTGTAGTCCGCG 7205 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || || || | || || || ||| | || | || |||||||||||||| Sbjct 7204 AGCGTGCGGCCCTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 7145 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || || | || | || | ||||||| | |||||| Sbjct 7144 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTTCTCGATGGTGTCGCTCGCCTCGAC 7086 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | | ||| |||||||| ||||| || || || || ||||| Sbjct 7085 CTCGAGGGCGATCGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 7038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451986238579920