Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq451 109 7e-19 >seq451 Length=15904 Score = 109 bits (120), Expect = 7e-19 Identities = 206/301 (68%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 197027 CCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACA--TCTGGTTGTCGGG 197084 ||||||| ||||||||| || ||||| || ||||||| |||| || | || | | Sbjct 15495 CCTCGTCCTGAAAGCCCGTGCCAATCTTGCAGATGGATTGGTACTCGTCCGATT--CCGC 15438 Query 197085 ATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAA 197144 || ||| || || || | ||| |||| || |||| | ||||||| ||||| ||| Sbjct 15437 ATCGTAGCACGCCAGCAGGAAGCCGCCCAAGACACCCGCCCGCTTTCCCTTCCCGTAGAA 15378 Query 197145 GCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAG 197204 | | ||||| ||||| || || |||||| || || |||||||| || |||||||| Sbjct 15377 GGCGCCGATGGGCACCAAGTCGAGCGTGTCGGTGACGCCGTCCATGTAGTCCTTCTTCAG 15318 Query 197205 TTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTT 197264 || |||||| || | ||| || | ||| || || | | ||||| ||||| Sbjct 15317 CTTCAGCCAGAAGTGGGAGCGCTTTGCGGGCGTGTACGTCGCCTCCTCCTCCAGCGTCTT 15258 Query 197265 GATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAATGTCTTC 197324 |||||||| |||||||| | || | | || || || ||| |||| ||||| || Sbjct 15257 GATCATCAGGCCCTCGCAGCCGGCCGCGATCGACTGGTCCAGGAACTTTTGGATGTCCTC 15198 Query 197325 C 197325 | Sbjct 15197 C 15197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676704205721760