Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1609 212 8e-49 seq866 212 8e-49 seq2 206 3e-47 seq573 141 1e-27 seq238 109 7e-18 seq22 107 2e-17 seq83 104 3e-16 seq1188 100 3e-15 seq6 91.5 2e-12 >seq1609 Length=2085 Score = 212 bits (234), Expect = 8e-49 Identities = 259/350 (74%), Gaps = 5/350 (1%) Strand=Plus/Minus Query 868658 TTCTCGCGGGTCCCCCCACGGGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGC 868717 |||| || ||| ||| | | | | |||| ||||| ||||||| | || | | Sbjct 1624 TTCTTGCTGGTGCCCTCGCTGCTCATGACGCCGGCCTTCTGGTACTCGGCGACCTTCTTC 1565 Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 ||||| |||||||||||||| ||| ||||||| |||||| | ||| ||||||| Sbjct 1564 TCGAAGAAGTTGGTCTTGCCGGTGAGGGAGATCATCTCCATGAAGTCGAAGGGGTTGGTG 1505 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | ||||||||||| || || |||||| ||||||||||||| ||||| ||||||||| Sbjct 1504 GAGTTGTAGTGCTTCTCCAGGCCCAGCGACACGAGCAGGCGGTCCGCGACGAACTCGATG 1445 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 ||||||| ||||||| ||||||||||||||||||| ||| ||||||| |||| | Sbjct 1444 TACTGGCTCATGAGGTCGGCGTTCATGCCGATGAGGCGCACGGGCAGCGCGTCGCAGATG 1385 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACG-TCGGCCGAGGG 868956 ||||| |||||||| ||||||| ||| |||||| | || | | || ||| || | Sbjct 1384 AACTCCTTCTCGATGACGACGGCGTCGGTGATGATGT-CCAGCACGCGCTCGCGCGGCAG 1326 Query 868957 CTTG---TTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA 869003 |||| |||| | | | |||| ||||||||||| |||||| ||||| Sbjct 1325 CTTGTGTTTGATGTGGCTGTTGTACAGCAGGCAGGCGAAGTCGGTGTGCA 1276 Score = 188 bits (208), Expect = 9e-42 Identities = 229/312 (73%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || || |||||||||||| ||||| | | |||| | ||| | | Sbjct 994 GAGTGGATGTTCTCCATCATGAGCTGGAAGCCGTAGAAGGCGCGCGCCTCGGGCACCTTG 935 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||| || | || ||||||||| | ||||||||||||||| ||||||| Sbjct 934 ACGTCGGACATGAAGCGCACCGCGAGGTTCTCGACGACGATGCCGTCGCTGCCGGCGAAG 875 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || ||||| ||||||||||| ||||| ||||| | ||||| ||| ||||||| | || Sbjct 874 AAGGCCAGCACGTGCTTGATGAAGTGCTGCTCGCCCTCGCTCAGCTTGACCCAGTCGGCG 815 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 |||| || |||||| | |||||| |||||||| || ||| || |||||| Sbjct 814 AGGTCGCTGCCGAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGCTCCTTGTAC 755 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGC 869932 | ||| | | ||| | |||| |||||||| || |||||| |||||| || || Sbjct 754 TTGCGCCAGATGTCGTGGAACTGGATGGGGAAGAGCACGTAGCGGTAGGGGTTCTCCTGC 695 Query 869933 AACAGGGGTTCG 869944 ||| || ||| Sbjct 694 TGCAGCGGCTCG 683 Score = 170 bits (188), Expect = 2e-36 Identities = 208/284 (73%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||||| |||| |||||||||||| | |||||||||| Sbjct 1273 CCCTCGTCGCGCGAGATGAGCTCGTTGCTGAAGGTGAGGCCGGGCATCACGCCGCGCTTC 1214 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||||| ||| ||||| ||||||||||||||||| || ||| Sbjct 1213 TTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCCGCGAAG 1154 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 |||||||||||||| ||| || || || || |||||| || |||||| Sbjct 1153 CCGATGAGCCGCTCCTGGAAGCTGGCGGCGC------TGCCGATCCAGCGCACGGCCCAG 1100 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 | |||||| ||| | | || | || | ||||||| | | ||| | ||| || Sbjct 1099 TTGGCCTTCTTCTGGATGCAGGGGATGGTCTGGATGGCGTGCAGCAGGCGCAGCTTCTCC 1040 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || |||| ||| |||||||||| ||| | ||| || ||||| Sbjct 1039 GCGCTGTCCGTGATGTAGGTGTCGAGCAGCACCGAGTACGTCTC 996 >seq866 Length=6634 Score = 212 bits (234), Expect = 8e-49 Identities = 261/351 (74%), Gaps = 7/351 (2%) Strand=Plus/Minus Query 868658 TTCTCGCGGGTCCCCCCACGGGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGC 868717 |||| || ||| ||| | | | | |||| ||||| ||||||| | || | | Sbjct 423 TTCTTGCTGGTGCCCTCGCTGCTCATGACGCCGGCCTTCTGGTACTCGGCGACCTTCTTC 364 Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 ||||| |||||||||||||| ||| ||||||| |||||| | ||| ||||||| Sbjct 363 TCGAAGAAGTTGGTCTTGCCGGTGAGGGAGATCATCTCCATGAAGTCGAAGGGGTTGGTG 304 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | ||||||||||| || || |||||| ||||||||||||| ||||| ||||||||| Sbjct 303 GAGTTGTAGTGCTTCTCCAGGCCCAGCGACACGAGCAGGCGGTCCGCGACGAACTCGATG 244 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 ||||||| ||||||| ||||||||||||||||||| ||| ||||||| |||| | Sbjct 243 TACTGGCTCATGAGGTCGGCGTTCATGCCGATGAGGCGCACGGGCAGCGCGTCGCAGATG 184 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACG-TCGGCCGAGGG 868956 ||||| |||||||| ||||||| ||| |||||| | || | | || ||| || | Sbjct 183 AACTCCTTCTCGATGACGACGGCGTCGGTGATGATGT-CCAGCACGCGCTCGCGCGGCAG 125 Query 868957 CTTG---TTGACG-AGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA 869003 |||| |||| | ||| | |||| ||||||||||| |||||| ||||| Sbjct 124 CTTGTGCTTGATGTAGC-TGTTGTACAGCAGGCAGGCGAAGTCGGTGTGCA 75 >seq2 Length=121565 Score = 206 bits (228), Expect = 3e-47 Identities = 284/396 (72%), Gaps = 17/396 (4%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || ||| || |||||||| ||||||| ||| | ||||||| ||| |||| ||||||||| Sbjct 26253 GCCCTGATCAACGTAGCGGGCCGTGTTGTTCCACACGCGGATCATCGGCATGAGGCCGTT 26312 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| ||||||||||||||| | |||| |||||| ||||| | ||||| | Sbjct 26313 CGACGTGCCGTTGGTGCCCGCGATGTAGCTGCCGGCCGCGCGGATGTTGTGGATATGGAT 26372 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 ||| |||||||| |||| |||| ||| | ||||||| || ||||||||||||||||| Sbjct 26373 GCCAATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCC 26432 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| |||| ||||||| | || || |||||||| | ||||| | | || Sbjct 26433 CTCGATGCTGTCGTCCTTCATCGCGACCAGGAAGCACGAGCTCATCTGCGGCTTGGGGGT 26492 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATG-GCGTCGT 1630360 |||||||||||||||||||| || || ||||| || | |||||||| || | || Sbjct 26493 ACCGGCGTTGAAGAGCGTGGGGGTGGCGTGCGTGAAGAAGCCCTGCGACATGAGCAT-GT 26551 Query 1630361 AGGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGG 1630420 | ||| | | |||||| |||| |||| | || | | ||| || | Sbjct 26552 ATGTGTTGCGGACGCGCTCCAG------GTCCTTG---------CCGTGGATGCCAATCG 26596 Query 1630421 CGACGCGCATGAGCATGTACTGGGGCCGCTCGACGA 1630456 | ||||||| || ||||| ||| || ||||| |||| Sbjct 26597 CCACGCGCAGGATCATGTGCTGCGGACGCTCCACGA 26632 Score = 161 bits (178), Expect = 1e-33 Identities = 368/548 (67%), Gaps = 18/548 (3%) Strand=Plus/Plus Query 1626984 GTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGT 1627043 ||| ||||| |||| ||||||||| |||||||| | |||||| || ||||||||||| || Sbjct 24855 GTCCACGGTGAACTTGATGGCGTCCGCGGCGGGGCGGGTGCGGAGGTAGTACATGCCCGT 24914 Query 1627044 CTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTC 1627103 |||||| ||| ||| || | |||||| |||||||| | ||| | | | Sbjct 24915 CTTGAGCCCGGACTTCCAGCAGTGGAAGTGCATGGACGTGATCTGACCGGAGGAGGGGCT 24974 Query 1627104 GGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAG--GGCGCGCGATCGGCCGCC 1627161 | | ||| ||| | ||||| ||| || | || | |||||| |||| ||| Sbjct 24975 CTCCAGGAACAAGTTCATGGACTGCGACTGATCAATGTACTTGCCGCGCG--CGGCGGCC 25032 Query 1627162 ATGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCG 1627221 ||||||||| | || | | | |||||| ||||| | ||| | ||||| Sbjct 25033 ATGTCGATGAGGGTGCGCTGCGAGATCTCCCAGACGGTGCGGTAGAGCTCGCGCAGGTCC 25092 Query 1627222 GGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGTCG 1627281 | || | || | || | | ||||||||| |||| | || || | || | Sbjct 25093 GCGGGGATGTC--CATCAC----GTTCTGCACCGACCCGTTGAAGGTGATGATCTCGTTG 25146 Query 1627282 CGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGACC 1627341 || | | | |||||||||||||| || ||| | | || |||| ||| || Sbjct 25147 CGGATCTTGTCGCTCCACAGGCCGCGCTGAATGAGGTCCATCACGAGGTACTTGTTCACA 25206 Query 1627342 ACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCAC 1627401 |||| || ||||| |||||||||||| |||||||||| ||||| | |||| | Sbjct 25207 ACGGGGAACTCGCCGCTCAGCACGCGGCGCACGTAGATGTTGGAGGTGAAGGGCTCGAAG 25266 Query 1627402 GCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGC 1627461 |||| |||||||||| ||||||||||| | ||| || ||||| |||| | ||| ||| Sbjct 25267 CACTCGTTGTTGCCCAGAATCTGCGACGTGGAGGCGGTCGGCATCGGCGCGAGGAGCAGC 25326 Query 1627462 GAGTTGCGCAGGCCGTGCTGTCGAACTAGCGCGC----GCAGCGCGTCCCAGTCCCAGCG 1627517 |||||||||| ||| || || | ||||| || || ||||||||||||| Sbjct 25327 GAGTTGCGCATGCCAACCT---CCACGA-CGCGCTTCTTCAAGGCCGCCCAGTCCCAGCG 25382 Query 1627518 GCCGCTCT 1627525 |||||||| Sbjct 25383 GCCGCTCT 25390 Score = 134 bits (148), Expect = 2e-25 Identities = 293/445 (66%), Gaps = 12/445 (3%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| || |||||| ||||||||||| | || | | || || |||||||||||||| | Sbjct 25817 ACTCGATGATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTGCTGGTTCG 25876 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | |||| ||| ||||||| ||||||| | ||| |||| || |||||||| | | Sbjct 25877 ACTTGGCGTTGCAGGCATCCTTGTAGAGCATGAACGGCACGCCCGTTTCGATCTGAGACT 25936 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGG---CCCTNNN 1628338 | | ||||| |||| | || |||| | ||| || || || |||| Sbjct 25937 CCAGAATGGCAAACCACAGCTCCTGCGCCTGGACG---GTGCGGATGCCCATACCCTTCG 25993 Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398 || || || |||||| ||| ||| |||||||||| Sbjct 25994 CTTCGTACCCCTCGTAGAGCTTCTCGAACTCCTCGCCGTGGCAGTCGCTGAGGCCGGGCG 26053 Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGT 1628458 | | || | ||||| ||| | ||| | || | |||| ||| ||||||| Sbjct 26054 TCGTGTTGGGGTCCATGAGCGTCCACTTGCCCTCACTCTTCACGCGCTTCATGAAGAGGT 26113 Query 1628459 CACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTT-- 1628516 | |||| || ||||| |||||||||||||| || | ||||||||||| ||| Sbjct 26114 CCGGGATCCAGAGCGCGTAGAAGAGGTCGCGCGCGCGCTGGTCCTCCTTGCCAGTGTTGC 26173 Query 1628517 -CTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 1628575 ||| |||| || | |||| |||||||||||||||||||| ||||| ||| | Sbjct 26174 GCTTCATGAGCAGGAAC---TCGAAGATGTCGGCGTGCCACGGCTCGAGGTACATGGCGA 26230 Query 1628576 AGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||||||||||| |||||||| Sbjct 26231 AGGCGCCCTTGCGCTTACCGCCGCC 26255 Score = 91.5 bits (100), Expect = 2e-12 Identities = 139/193 (72%), Gaps = 10/193 (5%) Strand=Plus/Plus Query 1627787 CGTGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACG 1627846 ||| ||||| ||||| |||||| || |||||||||| |||| | | |||| | | Sbjct 25505 CGTAGTAGATGGTCTCGAAGATGTCCTCGTTGAGGCGCTGCGCCTCCGGGCTCGTGAAGG 25564 Query 1627847 GCAGGTCCATCATGGCA-AACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGG 1627905 || | || |||| || |||| ||||||||||||||||||| ||| || || ||| Sbjct 25565 AGAGCCGGAGCA-GGCAGAAGGCGTCTGCGAGGCCCTGCACGCCGAGGCCGATGGGGCGG 25623 Query 1627906 TGGCGCAGGTT----CGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCAC 1627961 ||||||| ||| || ||| || |||| || ||||||| ||| ||| || || Sbjct 25624 TGGCGCATGTTGCTGCGCTCGGC-GGTCTCG---ACGGGGTAGTAGTTTCGGTCTATGAC 25679 Query 1627962 GCGGTTGAGGTTG 1627974 |||||||||||| Sbjct 25680 ACGGTTGAGGTTG 25692 >seq573 Length=12279 Score = 141 bits (156), Expect = 1e-27 Identities = 338/512 (66%), Gaps = 53/512 (10%) Strand=Plus/Minus Query 1573779 CCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGC-ACGC 1573837 |||||| | || ||||| || || | | |||| ||| | ||||||||| ||| |||| Sbjct 9107 CCGTGGGTGGAGAAGTACCGTCCGACGACCCTCGCCGAGCTGGTCGGCAAC-AGCGACGC 9049 Query 1573838 CGTCGCCTATCTCAGAGCGCTGGCTGCCGACGGCGACATGCCCAACCTCTTGCTGGCGGG 1573897 |||| | | |||| |||||| || || ||| || |||| ||||| |||| ||||| Sbjct 9048 GGTCGGCAAGCTCATGCTGCTGGCCGCGGAGGGCAACCTGCCGAACCTGCTGCTCGCGGG 8989 Query 1573898 TCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGC-- 1573955 ||||||||||| |||||||| |||||||| ||| || ||| | ||| || || Sbjct 8988 GCCGCCCGGCACCGGCAAGACGACGAGCATGCTGTGCCTCGCGAACGACCTGCTGTGCGG 8929 Query 1573956 --------GCGGCCGC----CG----ACGAGGCCGTGCTCGAACTCAACGCGTCGGACGA 1573999 |||||||| || |||||||||||| || ||||||||| ||||| Sbjct 8928 CGGCGGCAGCGGCCGCGAGGCGCTGCGCGAGGCCGTGCTGGAGCTCAACGCGAGCGACGA 8869 Query 1574000 GCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGC---CTCCAAGAGGA---- 1574052 ||||| ||||||| ||||| ||| ||||||| | ||| | |||| || Sbjct 8868 CCGCGGGCTCGACGTGGTGCGGGAGAAGATCAAGCTCTTCGCGCAGACAAAGAAGACGTT 8809 Query 1574053 -TCGAC--------------------CTGCCGC-CCG----GACGCCACAAGGTGATCAT 1574086 || | | ||||| ||| | | ||||||| | | || Sbjct 8808 TGCGCCGGCGGCGGCGGACGGCGGCGCGGCCGCGCCGAGGCGGCTCCACAAGATCGTGAT 8749 Query 1574087 CCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGA 1574146 || |||||||| ||| || | ||| | || || |||||||| |||||| || ||||| Sbjct 8748 ACTGGACGAGGCGGACAGCATGACGCCCGCCGCGCAGCAGGCGCTGCGGCGGACGATGGA 8689 Query 1574147 AAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGA 1574206 ||||| | ||| || ||||| ||| | || |||||| || | | ||||||| Sbjct 8688 GCTGCACAGCCACAGCACCCGCTTCGCCTTCGCCTGCAACGCGAGTAACAAGATCATCGA 8629 Query 1574207 GGCCCTCCAAAGTCGCTGCGCCATTCTGCGCT 1574238 | || |||| ||||||||||| | |||| Sbjct 8628 GCCCATCCAGTCGCGCTGCGCCATCATCCGCT 8597 >seq238 Length=26460 Score = 109 bits (120), Expect = 7e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 509045 CGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATGTTTCTGCAC 509104 |||||||| ||| | ||| | | |||||||||| || ||| | ||| | ||| Sbjct 12429 CGCGGCTTCGTGGCGAGCTCCTTTTACAGCGGCCTCAAGCCGACAGAGTTCTTTTTCCAC 12370 Query 509105 ATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTAC 509164 | || | ||| |||||||| || ||||||||||| |||||||||||||||||||| ||| Sbjct 12369 ACAATGGCCGGCCGCGAGGGGCTGGTCGACACGGCGGTCAAGACGGCCGAGACGGGGTAC 12310 Query 509165 ATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCT 509199 ||| | ||||| | |||| ||||||||| ||| Sbjct 12309 ATCTATCGCCGCCTGAGCAAGGCGATGGAGAACCT 12275 Score = 95.1 bits (104), Expect = 1e-13 Identities = 129/176 (73%), Gaps = 8/176 (5%) Strand=Plus/Minus Query 507638 AACCGGCAGCCGTCGCTGCACATGGGCTCCATGCTCATGCACAAGGTG---GTGCCCATG 507694 ||||||||||||||||||||| ||||||| | |||| | | | |||| || Sbjct 13527 AACCGGCAGCCGTCGCTGCACCGCATCTCCATGATGGCGCACCACGCGCGCGTGC---TG 13471 Query 507695 CCCGGGCGCACCATGCGATTCAACCTG-GCCGTCACGGGCACCTACAACGCCGACTTTGA 507753 || |||||| | || |||||| | || | || || | |||||||| ||||| || Sbjct 13470 CCGTACCGCACCTTCCGCTTCAACGTCTGCTGCTGCGCGC-CGTACAACGCGGACTTCGA 13412 Query 507754 CGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGA 507809 |||||||||||||||| ||||||| |||| | ||| ||||||||| |||| || Sbjct 13411 CGGCGACGAGATGAACGTGCACGTCGTCCAGACGGAGGAGGCGCGCGCGGAGGCGA 13356 >seq22 Length=67914 Score = 107 bits (118), Expect = 2e-17 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 507103 GGAGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAA 507162 |||||| | ||||||||| || || | |||||||| ||||||||||| || | Sbjct 34656 GGAGCGCCTGAAGGGCAAGTTCGGCCGGCTGCGCGGCAACCTGATGGGCAAGCGGGTGGA 34597 Query 507163 CTTTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGT 507222 ||| ||||||| | ||||||| | ||||||| | |||||| | |||||||| ||||| Sbjct 34596 CTTCTCCGCGCGGACGGTCATCACCGGCGACCCCAATATCGACGTGGACGAGGTCGGCGT 34537 Query 507223 GCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGT 507264 ||||| ||| || |||||||||||| || ||||| || Sbjct 34536 GCCCTTCTCCGTCGCCATGACGCTCACCTTCCCGGAGCGTGT 34495 >seq83 Length=45647 Score = 104 bits (114), Expect = 3e-16 Identities = 136/185 (74%), Gaps = 20/185 (11%) Strand=Plus/Minus Query 733076 GCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGCACCGTGGG 733135 ||||| ||| | |||||||||| | ||||||||||||||||| |||||||| | Sbjct 31328 GCGCCCGCCGACGGTGGGCGACAAGTTCTCGTCGCGCCACGGCCAGAAGGGCAC-----G 31274 Query 733136 CAGCGTGCGCTCCAC-------CG-AGGACATGCCCTGGTCGCCGCGCGGCGGCGC--CA 733185 | || |||||||| || | ||| |||||| || || ||| | | || || Sbjct 31273 CTGC---CGCTCCACATACGCGCGCACGACCTGCCCT--TCTCCTCGCAGACGGGCATCA 31219 Query 733186 CGCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGC 733245 |||||||| | | ||||||||||||||| ||||||| ||||||||| | |||| | ||| Sbjct 31218 CGCCCGACGTGATCATCAACCCGCACGCCTTCCCGTCCCGCATGACCGTCGGCATGGTGC 31159 Query 733246 TCGAG 733250 | ||| Sbjct 31158 TGGAG 31154 >seq1188 Length=3738 Score = 100 bits (110), Expect = 3e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 869742 TGGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACA 869801 || ||||||| || ||||| ||||||||||| ||||| ||||| | ||||| ||| | Sbjct 3738 TGCCGGCGAAGAAGGCCAGCACGTGCTTGATGAAGTGCTGCTCGCCCTCGCTCAGCTTGA 3679 Query 869802 CCCAGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGG 869861 |||||| | || |||| || |||||| | |||||| |||||||| || ||| Sbjct 3678 CCCAGTCGGCGAGGTCGCTGCCGAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCT 3619 Query 869862 CCTTTTTGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGG 869921 || |||||| | ||| | | ||| | |||| |||||||| || |||||| || Sbjct 3618 GCTCCTTGTACTTGCGCCAGATGTCGTGGAACTGGATGGGGAAGAGCACGTAGCGGTAGG 3559 Query 869922 GGTTGTCGCGCAACAGGGGTTCG 869944 |||| || || ||| || ||| Sbjct 3558 GGTTCTCCTGCTGCAGCGGCTCG 3536 >seq6 Length=96275 Score = 91.5 bits (100), Expect = 2e-12 Identities = 244/374 (65%), Gaps = 4/374 (1%) Strand=Plus/Minus Query 733187 GCCCGACATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCT 733246 ||| ||| || | |||||||||||||||||||| ||||| ||||| | | | || | Sbjct 30935 GCCGGACCTCATCATCAACCCGCACGCCATCCCTTCGCGTATGACGGTTGCGCACTTGAT 30876 Query 733247 CGAGGCCCTCCTGGGCAAGGTGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTT 733306 |||| | || |||||||| || ||| | |||| | | ||| |||||||| Sbjct 30875 CGAGACGCTTGCCGGCAAGGTCGCGTGCTACAAGGGGGGCGAGGTGTACGCGACGCCCTT 30816 Query 733307 TGGCGGCGTCACCNNNNNNNNNNNNNNNNNNGAGTTGGCCC-GCCACGGGTGCGAGCGCT 733365 || |||| | | | || || || ||| || |||| | Sbjct 30815 CTGCTCCGTCGTCGTCGAGGACTTTGGCAAGGCGCTGCACCAGCTGCGGTCGC-AGCGGT 30757 Query 733366 ACGGCAAGGAGGTGCTCTACCACCCGCACACCGGCGAGCCCATGGCGGCGTTGATCTTCT 733425 ||||||| ||| |||||| || |||||| ||| ||| ||| | ||||| | Sbjct 30756 ACGGCAACGAGTGCCTCTACAACGGGCACACGGGCCTGCCGCTGGACCACCTCATCTTTT 30697 Query 733426 -CGGCGCCGGTCTACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATCCACGCGCGC 733484 |||| ||| || |||||| |||| |||| || | ||||||||| ||||||||| Sbjct 30696 TCGGC-CCGACCTTTTACCAGCGCCTCAAGCACTTGTCGGGCGACAAGATTCACGCGCGC 30638 Query 733485 CCGCGCGGTCCCGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGCTCGCGCTCGGGC 733544 || ||||| ||| ||||| |||| |||||| ||||| ||| ||| | |||| Sbjct 30637 CCCCGCGGGCCCCTGCAGCCGCTCGTGCGGCAGCCCACGGAGGGTCGCGCGCACGAGGGC 30578 Query 733545 GGCTTCCGTCTCGG 733558 ||| |||| |||| Sbjct 30577 GGCCTCCGGTTCGG 30564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106892841821634