Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq45 95.1 3e-15 >seq45 Length=57489 Score = 95.1 bits (104), Expect = 3e-15 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAG 37263 ||||| || | || |||| || || ||||| ||| | ||| || ||||| ||| Sbjct 12699 GGCGAGCTCGCGGTCGTCCCCGGGTCCATGGGCGCGCGCAGCTACATTGTGCGCGGGAAG 12758 Query 37264 GGAAAT-TCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGC 37322 || || | | | | | ||| || ||| |||||| ||||| || | ||| | | Sbjct 12759 GGCAACATGAGCAGC-TACTGTTCCTGCTCCCACGGCGCCGGGCGCCGCTTCAGCAGAGG 12817 Query 37323 CGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTG 37382 ||| | || ||||| ||||| | | || || | ||||||||| | || | ||||| Sbjct 12818 CGAGACGAAGCGCCGCTTCACGCTGGCCGACCACGTGGCGGCCACTCAGGGAGTGGAGTG 12877 Query 37383 CCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGT 37442 |||||| || |||| ||| |||| || || || || || ||||||||||||||||| || Sbjct 12878 CCGCAAGGACGCCGGCGTGCTCGATGAAACACCCGCCGCCTACAAGGACATCGATGCCGT 12937 Query 37443 CATG 37446 |||| Sbjct 12938 CATG 12941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139278234728024