Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq650 102 8e-17 >seq650 Length=10457 Score = 102 bits (112), Expect = 8e-17 Identities = 147/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 107331 ACCGTGAGCGTCGTGTTGATGAGGAGCACCCCCTGGAGGGCCCACTTTTCCAGGTAGCCG 107390 || || ||||||| ||| | | ||| || |||||| ||||| | | |||||| ||| Sbjct 6532 ACGGTCAGCGTCGCGTTCAGCATGAGGACACCCTGGTCCGCCCAGCTCTGCAGGTACCCG 6473 Query 107391 TG-GGCGGGGAGGCGAAATGCCGGGTAGGTCTTTTGC-ACCGCCGCGTAGATGTTGCGCA 107448 || ||||| | ||||| |||||| | ||| | || | | || ||| ||||| || | Sbjct 6472 TGCGGCGGCGCCGCGAA--GCCGGGGATGTCCTGCGCCAGCTCCTTGTACATGTTTCGGA 6415 Query 107449 GGCTTGGGGGAACTGGCACCCCCTTTCGCACGCTGAAAGCCAGCCCGTGCGCCTGGCCGG 107508 |||| || || ||||||||| ||||| ||| ||||||||||||||| || Sbjct 6414 GGCTGGGCGGCGGCGGCACCCCCGGCTGCACGGAGAAGCACAGCCCGTGCGCCTGCCCCA 6355 Query 107509 GGCCGTGGTAGGGGTCCTGGCCGA 107532 | ||||||| ||||||||||||| Sbjct 6354 CGTCGTGGTACGGGTCCTGGCCGA 6331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484977000555120