Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq45 82.4 5e-11 >seq45 Length=57489 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/124 (75%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 46816 CCACCCTCACGTCGCTCTGATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTTGGCAC 46875 |||||| |||||| | ||||| |||| |||||||||| || | | || || || Sbjct 11876 CCACCC---CGTCGCCATCATGCCAGATGTCCACGGCGGCATCGGGTGCACGGTCGGGAC 11932 Query 46876 GGTGATACCCACGGTGGACGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGGTGCGG 46935 |||||| || ||| | ||| ||||||| ||| |||||||||||||| |||||||| Sbjct 11933 GGTGATCCCGACGAGCGGCGCGCTGATCCCCGCCAGCGTCGGCGTGGACATTGGGTGCGG 11992 Query 46936 CATG 46939 |||| Sbjct 11993 CATG 11996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296241961035838