Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq45 91.5 9e-14 >seq45 Length=57489 Score = 91.5 bits (100), Expect = 9e-14 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 48190 CGTCGCCCTCATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTCGGCACGGTGATTCC 48249 ||||||| ||||||| |||| |||||||||| || | | ||||| |||||||| || Sbjct 11882 CGTCGCCATCATGCCAGATGTCCACGGCGGCATCGGGTGCACGGTCGGGACGGTGATCCC 11941 Query 48250 CACGGTGGACGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGCTGCGGCATG 48304 ||| | ||| ||||||| ||| |||||||||||||| || ||||||||| Sbjct 11942 GACGAGCGGCGCGCTGATCCCCGCCAGCGTCGGCGTGGACATTGGGTGCGGCATG 11996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299659435996534