Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2024 262 5e-65 >seq2024 Length=3994 Score = 262 bits (290), Expect = 5e-65 Identities = 506/740 (68%), Gaps = 10/740 (1%) Strand=Plus/Plus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||||||||| ||||| || | ||||| |||| |||| || ||| | | | || ||| Sbjct 2161 ACCGCCATCTTCATGGCAATCGTCGCGTACGGGTCGTAGTCCACCACCTCCACATC-TCC 2219 Query 145600 GCCCTGA-AGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCG 145658 | ||| | |||| || | || || | | || || ||||| ||| ||| | || Sbjct 2220 GACCTCATAGTCCTCCAAGTAGTCGCGCTCCTTCTTGAAGATGAGCACGGGGAAGCGGCG 2279 Query 145659 GGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTC 145718 || | |||||||| || ||| | |||||||||||| ||||||||| || || Sbjct 2280 CGGCACACGCGTCAGCTGCTCCTGCAGCGCCTCCACGTGGTTCTTGTAGACGTGAGCATC 2339 Query 145719 CCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778 |||||| ||| | || || || |||| ||| || ||| | ||||| || ||| Sbjct 2340 CCCCAGCGTGTGCACGAGCTCGCCCGGCTTGAGCCCGGTGGCCTTGGCGATCAAAATGGT 2399 Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 || | || ||| ||| ||||| |||||||| || |||||||| || | |||||| Sbjct 2400 GAGGAAGGCGTACGAGGCGATGTTAAAGGGCACACCGAGCCCCATATCGCAACTGCGCTG 2459 Query 145839 GTACAGCTGGCAGGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTG 145892 ||| ||| |||| ||||| | | || |||||||||||| | |||||||| Sbjct 2460 GTATAGCATGCAGCTCAGCTCCTGCGTGTTCGTGTTCACGTAGAACTGCCCGAGGAGGTG 2519 Query 145893 GCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCT 145952 ||| ||||| |||||||| | ||| | || |||||||| ||||||| || |||| Sbjct 2520 GCACGGCGGGAGGGCCATCTTGTCCAGCGCGGCGGGGTTCCACGCGGTGAAGAGCAGCCG 2579 Query 145953 CCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTG 146012 | | | |||||| |||||| | | | | | | | ||| ||| || ||||||| Sbjct 2580 GCGGTCGTTCGGGTTCGTCTTGAGCGTCTCGACGATGCGCTTGATCTGATCGACGCCCTT 2639 Query 146013 CCCCCGGTAATCTGTCTTGG-AGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACC 146071 || ||| | | || ||| || |||| ||||||||||||| | ||||||||| | Sbjct 2640 GCCGTCGTAGT-TCTCGTGGAAGGAGGTGTACTCGGCCCCGAAGTGGCGCCACTGGAAGC 2698 Query 146072 CGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGT 146131 |||| || ||||| |||||| ||| |||| || ||| | | |||||||| Sbjct 2699 CGTACACCGGCCCGAGGTCCATCTCCTCGTAGTGCGTGAGGCCGCGGCTGTCGAGGAAGG 2758 Query 146132 CCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCG 146191 | ||| |||||| |||||||||| | ||||||| | ||| |||| |||| || | Sbjct 2759 CGCGGCTGCCGTTGTCGTCCCAGATGTGGACGCCCTTGTCGGCGAGCAGCTTGGCGTTGG 2818 Query 146192 TGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGG 146251 | ||||| | |||||| | ||||| ||| ||| || | ||||||||| | ||| | Sbjct 2819 TCTCGCCCCTCAGGAACCAAATGAGCTCCTCGGAGACGCCGCGCCAGAAGACGCGCTTCG 2878 Query 146252 TGGTCAGCAGGGGGAACTGG 146271 | || ||||| || | |||| Sbjct 2879 TCGTGAGCAGCGGCAGCTGG 2898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590023103011200