Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_001847.1 Length=135301 Score E Sequences producing significant alignments: (Bits) Value seq413 89.7 4e-13 >seq413 Length=11997 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/229 (71%), Gaps = 10/229 (4%) Strand=Plus/Plus Query 98241 ACGGTGAGCGAGGTGTTAAGCAGCAGCACGCCGCGGCGCGCCCAGTCCTCTAGGCAGCCG 98300 ||||| |||| | ||| |||| ||| | ||| || ||||||| || ||| | ||| Sbjct 7958 ACGGTCAGCGTCGCGTTGAGCATCAGGATGCCCTGGTCCGCCCAGCTCTGCAGGTACCCG 8017 Query 98301 TGCGACGGCCGCG-GAGCTCCGGGAAAGTTCTTCTGCACG-GCAGC--GTAGATGTTCTG 98356 |||| ||| | || ||||||| | |||| || || || | ||| ||||||| Sbjct 8018 TGCGGCGGGGTCTTGAAGTCCGGGATA--TCTT--GCTCGAGCTCCTTGTACATGTTCTT 8073 Query 98357 GAGGCTGGGTGGGACCGGAACGCCGCGGTTCACGCTAAAAGCCAAGCC-GTGGGCTTGCC 98415 |||||| |||||| |||| ||||| | | |||| | |||| |||| ||| || || | Sbjct 8074 GAGGCTCGGTGGGGCCGGGACGCCAGGCTGCACGG-AGAAGCACAGCCCGTGCGCCTGGC 8132 Query 98416 CGCGGCTGTGATAGGGGTCCTGGCCCAGAATGACAACCTTGATGTCCTC 98464 || | ||| || |||||||||||||| | ||| ||||| | ||| || Sbjct 8133 CGATGTCGTGGTACGGGTCCTGGCCCAGCAAGACGACCTTCACGTCATC 8181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432799996412960