Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq303 98.7 1e-15 >seq303 Length=13852 Score = 98.7 bits (108), Expect = 1e-15 Identities = 288/439 (66%), Gaps = 6/439 (1%) Strand=Plus/Minus Query 157373 TCTTCAACGCGTTTCATAAATATATCGGGAACCCATAAAGCGTTCATCAAATCACGCGCT 157432 |||||| |||| ||||| || | |||||| | ||| | |||| | || || ||||| Sbjct 11417 TCTTCA-CGCGCTTCATGAACAGATCGGGGATCCAGAGCGCGTAGAACAGGTCGCGCGCA 11359 Query 157433 TTGGTGTCTTCGCTGCCAATGTTTCGACGCATGTGTAAAACGTCCATAATGTCGCAATGC 157492 ||| || |||| |||| || |||| | | || || | ||||| ||| Sbjct 11358 CGCTGGTCGTCCTTGCCGGTGTTGCGCTTCATGAGCAGAAACTCGAAGATGTCCGCGTGC 11299 Query 157493 CACGGTTCAACGTACACTGCTTGGGCTCCTTTTCGCTT---GCCACCTTGATCCACGTGA 157549 ||||| || | ||||| || ||| || || ||||| ||| || |||||||||| Sbjct 11298 CACGGCTCGAGGTACATGGCGAAGGCACCCTTGCGCTTACCGCCGCCCTGATCCACGTAG 11239 Query 157550 CGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTCGTA 157609 || || ||||||| | || || | ||| || | || ||| ||| ||||||||||| Sbjct 11238 CGGGCCGTATTATTCCACACACGGATCATCGGCATGAGGCCGTTGGACGTGCCGTTCGTG 11179 Query 157610 GATTTTATTTTGCTG-TTGCGGCCGCGTACGCTGTTCACGTTCAATCCAATACCGCCGCC 157668 || | |||| |||| | || | | ||| ||||| | ||||| |||||| | Sbjct 11178 CCGGCGATGTAGCTGCCCGCGG-CACGGATGTTGTGCACGTGGATGCCAATGCCGCCGGC 11120 Query 157669 GTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATCGCT 157728 | || ||||| |||||| || || | |||| |||||||| |||||| || Sbjct 11119 GGCCTTGCTGATCACGGCGCACTCCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCATC 11060 Query 157729 TTCCATGGTCAATAGAAAACATGAACTCATCTGCGGAGTCAGACTGCCGGCAGCGAACAT 157788 | ||| | || || || || || |||||||| || | | ||||||| ||| | Sbjct 11059 CTTCATCGCCACCAGGAAGCACGAGCTCATCTGGGGCTTGGGGGTGCCGGCGTTGAAGAG 11000 Query 157789 GGTTGGGCTTGCGTGCGTG 157807 ||| || | || || ||| Sbjct 10999 GGTGGGTGTCGCATGGGTG 10981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506968261689600