Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq413 109 5e-19 >seq413 Length=11997 Score = 109 bits (120), Expect = 5e-19 Identities = 161/226 (71%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 99547 ACGGTGAGCGAGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCG 99606 ||||| |||| | |||||||| ||| | ||| || ||||||| || |||| | ||| Sbjct 7958 ACGGTCAGCGTCGCGTTGAGCATCAGGATGCCCTGGTCCGCCCAGCTCTGCAGGTACCCG 8017 Query 99607 TGCTGCGGCCGCGGG--GTCCCGGGGAAGTTCTTCTGCACGGCCGCGTAGATGTTCTGGA 99664 ||| |||| | | |||| |||| | | || | || ||| ||||||| || Sbjct 8018 TGCGGCGGGGTCTTGAAGTCC--GGGATATCTTGCTCGAGCTCCTTGTACATGTTCTTGA 8075 Query 99665 GGCTGGGCGGGATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGT 99724 |||| || ||| ||| ||||| | | |||| |||| ||| ||||| ||||| ||| Sbjct 8076 GGCTCGGTGGGGCCGGGACGCCAGGCTGCACGGAGAAGCACAGCCCGTGCGCCTGGCCGA 8135 Query 99725 GGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACGTCCTC 99770 | |||||| |||||||||||||| | ||||||||| ||||| || Sbjct 8136 TGTCGTGGTACGGGTCCTGGCCCAGCAAGACGACCTTCACGTCATC 8181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440859078172800