Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq413 96.9 3e-15 >seq413 Length=11997 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 94199 ACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCAGGCCTCCAGGCAGCCG 94258 ||||||||||||| ||| |||| ||| | || || ||||||| || |||| | ||| Sbjct 7958 ACGGTCAGCGTCGCGTTGAGCATCAGGATGCCCTGGTCCGCCCAGCTCTGCAGGTACCCG 8017 Query 94259 TG-GGCGGGCGCGGGCAGCGTCGGGTACGTCGCCCGGACCGCCGCGAAGATGTTGGCCAG 94317 || |||||| | | || || || | || || | | || | | ||||| || Sbjct 8018 TGCGGCGGGGTCTTGAAGTCCGGGATATCTTGCTCG-AGCTCCTTGTACATGTTCTTGAG 8076 Query 94318 GCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCCCGTGGGCCTGGCCCGG 94377 |||||| ||| ||| || || || | ||| |||| ||||||||| |||||||| Sbjct 8077 GCTCGGTGGGGCCGGGACGCCAGGCTGCACGGAGAAGCACAGCCCGTGCGCCTGGCCGAT 8136 Query 94378 CCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACGTCCTC 94422 ||||||||||||||||||| | | ||| ||||| ||||| || Sbjct 8137 GTCGTGGTACGGGTCCTGGCCCAGCAAGACGACCTTCACGTCATC 8181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458905435804800