Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq303 226 7e-54 >seq303 Length=13852 Score = 226 bits (250), Expect = 7e-54 Identities = 1118/1750 (64%), Gaps = 61/1750 (3%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 || || || ||||||||||| ||| | ||||||| || ||||| ||||| || ||| Sbjct 10874 ATCGTCGAGCGCCCGCAGCACATGATTCTGCGTGTGGCGATTGGCATCCACGGCAAGGAC 10933 Query 363502 GTTGATGCCGCGATTGAAACATATA-AGCTTCTAAGTGCTCGTG--TATTCACGCACGCC 363558 | || ||||| | || || | | || | || | | | | ||||| || || Sbjct 10934 CTCGA--CCGCGTGCGCCGCACCTACACCCTC-ATGTCCCAGGGCTTCTTCACCCATGCG 10990 Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618 || || || | | ||| || || || | || || |||||| || ||||| || | Sbjct 10991 ACACCCACCCTCTTCAACGCCGGCACCCCCAAGCCCCAGATGAGCTCGTGCTTCCTGGTG 11050 Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678 |||||||| || ||| ||||| |||| ||||| || ||| | || || | || Sbjct 11051 GCGATGAAGGATGACAGCATTGAGGGCATCTACGACACGCTCAAGGAGTGCGCCGTGATC 11110 Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGA--TCCACAATGTTCGTGCACAGAACAGTT 363736 |||| || ||||| ||||| ||| | | ||||| | ||||| | ||| | Sbjct 11111 AGCAAGGCCGCCGGCGGCATTGGC--ATCCACGTGCACAACATCCGTGCCGCGGGCAGCT 11168 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 |||| |||||| || || || || || | || ||| | ||||||| | | Sbjct 11169 ACATCGCCGGCACGAACGGCACGTCCAACGGCCTCATGCCGATGATCCGTGTGTGGAATA 11228 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 |||| || | ||||| || ||||| || || |||||||| || || || || ||||| | Sbjct 11229 ATACGGCCCGCTACGTGGATCAGGGCGGCGGTAAGCGCAAGGGTGCCTTCGCCATGTACC 11288 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA---AACACGGGAA 363913 ||||||| || || || || || |||||||| |||| ||| ||||| || | Sbjct 11289 TCGAGCCGTGGCACGCGGACATCTTCGAGTTTCT---GCTCATGAAGCGCAACACCGGCA 11345 Query 363914 AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 | || || |||||| || || |||||||| || || ||| | | || | || |||| Sbjct 11346 AGGACGACCAGCGTGCGCGCGACCTGTTCTACGCGCTCTGGATCCCCGATCTGTTCATGA 11405 Query 363974 AGCGCGTG--GAGGCAGGTAAGAATTGGTCACTCTTTTGCCC--ACACGAATGTCCAGGT 364029 |||||||| ||| ||| || ||| | | | ||| |||||| || || Sbjct 11406 AGCGCGTGAAGAGCGAGG--GCAAGTGGACGTTGATGGACCCCAACACGA--CGCCCGGC 11461 Query 364030 CTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGG 364087 || ||| || || || | || | | |||| ||||| | || || || ||| Sbjct 11462 CTCAGCGACTGCTACGGCGAGAAGTTCGAGCAGCTC--TACGAGGACTACGAGGCGAAGG 11519 Query 364088 GAAAGGCTCGTAAG-ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAG 364146 | | || ||| | || || | || ||| |||| ||||| |||||| | || || ||| Sbjct 11520 GCATGG-GCGTGCGCACCATCCAGGCGCAGGAGCTCTGGTTCGCCATCCTCGAGTCCCAG 11578 Query 364147 ATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAG 364206 || |||||||| || | ||||||||||| || |||||||| |||||||||||| Sbjct 11579 ATCGAGACAGGCGTGCCGTTCATGTTGTACAAGGACGCGTGCAACGAGAAGTCCAACCAG 11638 Query 364207 CAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCT 364266 || | || || || || || |||||| || || ||||||||||| || ||| | Sbjct 11639 AAGAATCTCGGCACCATCAAGTGCTCCAACCTGTGCACGGAGATTATTGAGTATACCTCC 11698 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA---- 364322 ||||| ||||| || || || ||| | || || |||||| | | |||||| || Sbjct 11699 CCCGAGGAGACGGCGGTGTGCAACTTGGCCTCCATCGCGGTGTCCAAGTTTGTGAATCGC 11758 Query 364323 -AGATGGTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAA 364379 ||| | || || |||||||||| || || || || || | | || | ||| Sbjct 11759 GAGA-AGAACGAGTTCGACCACCAGCTACTGTACGAGGTGACGAAGGAGATCACCTTCAA 11817 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG-CGTTCTAATA 364438 || || || || ||| ||| || || || || || | || | || || | Sbjct 11818 CCTGAACCGTGTCATAGACCGGAACTACTA-CCCCGTCGAGACGGCGCGCCGCAGCAACA 11876 Query 364439 TGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCA 364498 |||| | ||||| | || ||||| || ||||||||||| |||| || ||||| Sbjct 11877 TGCGCAACCGCCCCGTCGGCCTTGGCGTGCAGGGCCTCGCCGACGCCTTCTGCCTGCTCC 11936 Query 364499 AGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGT 364558 || | || || || || | ||| || |||| ||||| || || || | Sbjct 11937 GCCTGCCCTTCACGAGCCCGGAGGCGCAGCGTCTCAACGAGGACATCTTCGAGACCATCT 11996 Query 364559 ATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACT 364617 | | || || | || | | |||| || |||| | |||| ||| || Sbjct 11997 ACTACGCTGCCGTGGAGTCGTCCGTG-GACCTGGCTGCCGTCGAGGGCCCCTACGAGACC 12055 Query 364618 TATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCC- 364676 | |||| ||| ||| |||| | | ||||| || || ||| | | ||||| Sbjct 12056 TTCAAGGGCAGCCCCGCCTCGGAGGGTATGCTGCAGTTCGACCTGTGGCACGAGACGCCG 12115 Query 364677 ---ATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733 | | | ||| ||||||||||| |||| ||| | || || | || Sbjct 12116 AAGAGC-GGCCGCTGGAACTGGGACGCGCTGAAAAAGCGCGTCGTGGAGGTCGGCATGCG 12174 Query 364734 CAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793 |||||| || | ||||| |||||||| || || || | ||||| || || ||||| Sbjct 12175 CAACTCGCTGCTGCTCGCGCCGATGCCCACCGCCTCGACGTCGCAGATTCTTGGGAACAA 12234 Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853 |||||||||||| || || || ||| | || ||||| || || ||| || || Sbjct 12235 CGAGTGCTTCGAGCCCTTCACCTCCAACATCTACGTGCGCCGTGTGCTAAGCGGCGAGTT 12294 Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913 || || || || |||||||| || | ||| || | | ||||| || ||| | |||| Sbjct 12295 CCCCGTCGTCAACAAGTACCTCGTGATGGACCTCATCAAGCGCGGTCTCTGGAGCGACAA 12354 Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973 || ||| | |||||| || || || || ||||||||| | | | || || Sbjct 12355 GATCCGCAACGAGATCATCACCTTCAACGGGTCCGTGCAGAACGTGATGGACATCCCGGA 12414 Query 364974 AGATCTG---AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGA 365030 || ||| ||| | ||| ||||| ||||| || || ||| || ||||| || Sbjct 12415 GGACCTGCGCGAGC---TGTACCGCACCGTGTGGGAGATCTCGCAGCGCACCCTCATCGA 12471 Query 365031 TATGGCGGCCGATCGCG----GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 |||||||||| |||| || | || | | ||| |||||| | ||| | ||| Sbjct 12472 CATGGCGGCCGCCCGCGGCAAGTACATTGACCAGTC----GCAGTCGATGAACCTCTTCC 12527 Query 365087 TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTC 365146 || || | || | | || | || |||||||| ||| || | ||||| || |||| Sbjct 12528 TGGAGAGCCCTTCGTCGGGCCAGATCACGTCCATGCACTTCCACTGCTGGAAGTCGGGTC 12587 Query 365147 TTAAGACAGG 365156 | ||||| || Sbjct 12588 TCAAGACGGG 12597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303232029692960