Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3958 84.2 2e-11 >seq3958 Length=1797 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| |||||| | || || || || | || || || |||| || |||| |||||||| Sbjct 672 CAACATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACGATCGCCCTCGAGGTCGAGGC 613 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||||||||||| | || || ||||| ||||| || ||||| || || || Sbjct 612 GAGCGACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGA 553 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 || ||| | || || | || ||||||||| ||||| || Sbjct 552 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGA 514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429897853928400