Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq303 190 2e-43 seq5767 120 4e-22 >seq303 Length=13852 Score = 190 bits (210), Expect = 2e-43 Identities = 1058/1668 (63%), Gaps = 44/1668 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| ||||||||||| ||| ||||||| | | ||||| || | Sbjct 12612 CGGAGGTAGTACATGCCCGTCTTGAGACCCGACTTCCAGCAGTGGAAGTGCATGGACGTG 12553 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | || | | || || |||| |||||||||||| || || || || ||| | Sbjct 12552 ATCTGGCCCGACGAAGGGCTCTCCAGGAAGAGGTTCATCGACTGCGACTGGTCAATGTAC 12493 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776 || || | |||||||| || || | | | ||| |||||||| || | | Sbjct 12492 TTGCCGCGGGCGGCCGCCATGTCGATGAGGGTGCGCTGCGAGATCTCCCACACGGTGCGG 12433 Query 113777 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTG 113836 || || | | || || ||||| |||| | || || | ||| |||| ||| Sbjct 12432 TACAGCTCGCGCAGGTCCTCCGGGATGTCCATCACGTTCTGCACGGA----CCCG--TTG 12379 Query 113837 ACCATGA-GATCC---TTCATATCCTTTGAC--CAGAGACCAATCTTTTTGAGATCCTCC 113890 | ||| |||| | | ||| | | | |||||||| ||| |||| ||| | Sbjct 12378 AAGGTGATGATCTCGTTGCGGATCTTGTCGCTCCAGAGACCGCGCTTGATGAGGTCCATC 12319 Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 ||||| | ||| ||||| || ||||| || || || | || ||||| ||| Sbjct 12318 ACGAGGTACTTGTTGACGACGGGGAACTCGCCGCTTAGCACACGGCGCACGTAGATGTTG 12259 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATT-TGGGCGGTGGAGGCTGTGGG 114009 | ||| | ||||| |||||||| ||||| ||||||| | || | || ||||| ||||| Sbjct 12258 GAGGTGAAGGGCTCGAAGCACTCGTTGTT-CCCAAGAATCTGCGACGTCGAGGCGGTGGG 12200 Query 114010 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGC 114069 ||| || || | || || ||| || | || ||| | ||| | || || || Sbjct 12199 CATCGGCGCGAGCAGCAGCGAGTTGCGCATGCCGACCTCCACGACGCGCTTTTTCAGCGC 12140 Query 114070 GTCCCAGTCGTAGTTGAG---CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 114126 |||||||| || | ||| | | | | ||||||| || ||||| || ||||| Sbjct 12139 GTCCCAGTTCCAGCGGCCGCTCTTCGGCGTCTCGTGCCACAGGTCGAACTGCAGCATACC 12080 Query 114127 TTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA 114186 | ||||| || |||| || |||||||| |||||||| || | |||| || Sbjct 12079 CTCCGAGGCGGGGCTGCCCTTGAAGGTCTCGTAGGGGCCCTCGACGGCAGCCAGGTCCAC 12020 Query 114187 GCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGC 114246 | || ||| | ||| |||| || || ||||| || ||| | || | || || Sbjct 12019 GGACGACTCCACGGCAGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTGAGACGCTGCGC 11960 Query 114247 CTCGTCGGAATCA--AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 ||| ||| || || | || ||| || || | || ||||| || || || Sbjct 11959 CTC--CGGGCTCGTGAAGGGCAGGCGGAGCAGGCAGAAGGCGTCGGCGAGGCCCTGCACG 11902 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 || ||||| | ||||| | | ||| || || || ||||| ||||| || | Sbjct 11901 CCAAGGCCGACGGGGCGGTTGCGCATGTTGCTGCGGCGCGCCGTCTCGACGGGGTAGTAG 11842 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 |||| || || || | || || || ||||| |||| || | || | || Sbjct 11841 TTCCGGTCTATGACACGGTTCAGGTTGAAGGTGATCTCCTTCGTCACCTCGTACAGTAGC 11782 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | || || || | |||| ||| ||| |||| | | ||||| || |||| Sbjct 11781 TGGTGGTCGAACTCGTTCTTCTCGCGATTCACAAACTTGGACACCGCGATGGAGGCCAAG 11722 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 || ||||| | ||||| || || ||||| ||||| ||||| |||| || || Sbjct 11721 TTGCACACCGCCGTCTCCTCGGGGGAGGTATACTCAATAATCTCCGTGCACAGGTTGGAG 11662 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 | ||| |||||||| | ||||| || || ||||| ||| ||||| |||||||| | | Sbjct 11661 CACTTGATGGTGCCGAGATTCTTCTGGTTGGACTTCTCGTTGCACGCGTCCTTGTACAAC 11602 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG-GCGGC 114663 ||| | ||| || ||||| | ||||||| ||| || || ||||| || ||| | Sbjct 11601 ATGAACGGCACGCCTGTCTCGATCTGGGACTCGAGGATGGCGAACCAGAGCTCCTGCGCC 11542 Query 114664 TGGCACAGTGGCGTTGGCTCGC-CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 114722 ||| | ||| || || | |||| | ||||||| | |||||| || |||| Sbjct 11541 TGG-ATGGTG-CGCACGCCCATGCCCTTCGCCTCGTAGTCCTCGTAGAGCTGCTCGAACT 11484 Query 114723 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA-TTGA 114781 || || | || ||| || || | | | | ||| | | | ||| ||| Sbjct 11483 TCTCGCCGTAGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGTCCATCAACGTCCACTTGC 11424 Query 114782 CCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCC 114841 || | ||| ||| | ||||||||||| || || ||||||||||| || |||| || || Sbjct 11423 CCTCGCTCTTCA-CGCGCTTCATGAACAGATCGGGGATCCAGAGCGCGTAGAACAGGTCG 11365 Query 114842 CGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 114899 || || ||| || || | || ||| | || || ||| || | ||| | Sbjct 11364 CGC--GCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCATGAGCAGAAACTCGAAGATGT 11307 Query 114900 CCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGT 114956 ||||||||||||| || ||||||| |||| | ||||| || || || |||| | Sbjct 11306 CCGCGTGCCACGGCTCGAGGTACATGGCGAAGGCACCCTTGCGCTTACCGCCGCCCTGAT 11247 Query 114957 TTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGC 115016 || || | || || ||| | || || | ||| || |||| || | || || Sbjct 11246 CCACGTAGCGGGCCGTATTATTCCACACACGGATCATCGGCATGAGGCCGTTGGACGTGC 11187 Query 115017 CATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAAT 115074 | || || || ||| || | | ||| | || | || | ||| || ||||| Sbjct 11186 CGTTCGTGCCGGCGATGTAGCTGCCCGC--GGCACGGATGTTGTGCACGTGGATGCCAAT 11129 Query 115075 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGAT 115134 || || || ||| ||| ||||||||| |||| || ||||||| || || || Sbjct 11128 GCCGCCGGCGGCCTTGCTGATCACGGCGCACTCCTTGAGCGTGTCGTAGATGCCCTCAAT 11069 Query 115135 CGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA---CATTTGTGGCCTTGGTGTACC 115191 |||| |||| | || | |||||||| ||| ||| || ||| | || || || Sbjct 11068 GCTGTCATCCTTCATCGCCACCAGGAAGCA---CGAGCTCATCTGGGGCTTGGGGGTGCC 11012 Query 115192 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239 |||||||||||||| |||||||| ||| |||| | || |||||||| Sbjct 11011 GGCGTTGAAGAGGGTGGGTGTCGCATGGGTGAAGAAGCCCTGGGACAT 10964 >seq5767 Length=966 Score = 120 bits (132), Expect = 4e-22 Identities = 350/529 (66%), Gaps = 14/529 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || ||| ||||||||||||||| ||||| ||| | ||| ||||||| Sbjct 34 GTACTCGCCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCGGTGAGCGAGATCATCTCCAT 93 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAGGAGAC 125876 || || || ||||| | | ||| | | || | | ||| | | ||| || | Sbjct 94 GAAGTCGAAGGGGTTGGTGGCGTTGTAG-TGCTTCTCGAGCCCGAGCGACACGAGCAGGC 152 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 | || | |||| |||| ||||||| ||| || | |||||| ||||||||| | Sbjct 153 GGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGGCGTTCATGCCGATGAGGCG-C 211 Query 125937 ATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 | ||| |||||||| |||||||| ||||||| || | ||||| || | ||||||| Sbjct 212 ACGGGCAGCGCGTCGCAGATGAACTCCTTCTCGATGACGACGGCGTCGGTGATGATGGCG 271 Query 125996 TGAATGGTGTC-CACCCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTCCACGGCAA 126050 | | | || | ||| || ||| | || ||| |||| ||| | Sbjct 272 AGCACGCGCTCGCGGGGCAG--CTTGTGCTTGATGTGGCTGTTGTAGAGCAGGCAGGCGA 329 Query 126051 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCA 126110 | || ||| || |||||||| || |||||||| || || |||| || || |||| Sbjct 330 AGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTGAAGGTGAGCCCGGGCA 389 Query 126111 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCT 126170 | | || |||||||| | |||||| || | || || || || ||||||||||| |||| Sbjct 390 TCACGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATGCCCT 449 Query 126171 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACT 126230 | || ||||| | | ||| ||||| |||||| ||| | || | | ||| Sbjct 450 CGACGGCGGCGAAGCCGATGAGGCGCTCCTGGAAGGAG-GCGCC--GCTGCCGATCCAGC 506 Query 126231 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 || ||||| | ||||| |||| ||| || |||| ||||||||| || Sbjct 507 GCACGGCCCAGTTGGCCTTCTTCTGGATGCAGGGGATGGTCTGGATGGC 555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597299240822400