Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq303 295 7e-75 >seq303 Length=13852 Score = 295 bits (326), Expect = 7e-75 Identities = 1004/1542 (65%), Gaps = 62/1542 (4%) Strand=Plus/Plus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| | || || ||||| |||||||| || ||||| ||| |||||| ||||| | Sbjct 10984 CCATG-CGACACCCACCCTCTTCAACGCCGGCACCCCCAAGCCCCAGATGAGCTCGTGCT 11042 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 ||||| || ||| |||| ||| ||| || || | ||||| |||||||| || | Sbjct 11043 TCCTGGTGGCGATGAAGGATGACAGCATTGAGGGCATCTACGACACGCTCAAGGAGTGCG 11102 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | ||| || ||| || || || || ||| || ||| || | |||||| || Sbjct 11103 CCGTGATCAGCAAGGCCGCCGGCGGCATTGGCATCCACGTGCACAACATCCGTGCCGCGG 11162 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | ||||||| ||| || || ||||| |||||||||||| | || ||| |||| || | Sbjct 11163 GCAGCTACATCGCCGGCACGAACGGCACGTCCAACGGCCTCATGCCGATGATCCGTGTGT 11222 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 || || |||| ||||||||||| ||||| || || | | | |||||| | ||||| Sbjct 11223 GGAATAATACGGCCCGCTACGTGGATCAGGGCGGCGGTAAGCGCAAGGGTGCCTTCGCCA 11282 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACC 94243 | || |||||||| |||||||||||| | | || | | || ||| ||| Sbjct 11283 TGTACCTCGAGCCGTGGCACGCGGACATCTTCGAGTTTCTGCTCATG---AAGCGCAACA 11339 Query 94244 ACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTT 94303 |||||| || || | || | ||||| |||||||| |||||| | || || || | Sbjct 11340 CCGGCAAGGACGACCAGCGTGCGCGCGACCTGTTCTACGCGCTCTGGATCCCCGATCTGT 11399 Query 94304 TTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA--ATGTCC 94361 | ||||| ||||| ||| | | |||| || | | ||| | | | | || Sbjct 11400 TCATGAAGCGCGTGAAGAGCGAGGGCAAGTGGACG-TTGATGGACCCCAACACGACG-CC 11457 Query 94362 CGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCA 94421 ||| || |||| | || | || || | | || | ||||| || | Sbjct 11458 CGGCCTCAGCGACTGCTACGGCGAGAAGTTCGAGCAGCTCTACGAGGACTACGAGGCGAA 11517 Query 94422 GGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACA 94481 ||||| || | | || | || | |||| ||| ||| | || || Sbjct 11518 GGGCATGGGCGTGCGCACCATCCAGGCGCAGGAGCTCTGGTTCGCCATCCTCGAGTCCCA 11577 Query 94482 GGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCA 94541 | | ||||| || ||| | ||| |||| ||||||| | ||||| ||||||||||| Sbjct 11578 GATCGAGACAGGCGTGCCGTTCATGTTGTACAAGGACGCGTGCAACGAGAAGTCCAACCA 11637 Query 94542 GCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTC 94601 | || | ||||| |||||| |||| || |||||||| |||||| | |||||||| || Sbjct 11638 GAAGAATCTCGGCACCATCAAGTGCTCCAACCTGTGCACGGAGATTATTGAGTATACCTC 11697 Query 94602 TCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTG----- 94656 || || |||| || ||||| ||| ||| ||||||| |||||| || ||| Sbjct 11698 CCCCGAGGAGACGGCGGTGTGCAACTTGGCCTCCATCGCGGTGTCCAAGTTTGTGAATCG 11757 Query 94657 CGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGA 94716 ||||| | ||| | | | | | | ||| | ||| |||| || ||| Sbjct 11758 CGAGAAGA----ACGAGTTCGACCACCAGCTA-CTGTACGAG---GTGA----CGAAGGA 11805 Query 94717 AGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCG 94776 ||| ||| ||||||||| | || || ||| ||||| |||||||||| ||| || Sbjct 11806 --GATCACCTTCAACCTGAACCGTGTCATAGACCGGAACTACTACCCCGTC---GAGACG 11860 Query 94777 GAGAACT-CA--AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGAC 94833 | | | || ||| || | || ||| ||||| | ||||| ||||| |||| ||| Sbjct 11861 GCGCGCCGCAGCAACATGCGCAACCGCCCCGTCGGCCTTGGCGTGCAGGGCCTCGCCGAC 11920 Query 94834 GCGCTGGTGA-TGATGCGTCTGCCCT--ACGACTCTGTCGACGCGGCGGGTTTGAATTTG 94890 || || || || | || ||||||| |||| | | | ||| ||| | | || | Sbjct 11921 GC-CTTCTGCCTGCTCCGCCTGCCCTTCACGAGCCCGGAGGCGCAGCG--TCTCAACGAG 11977 Query 94891 AACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG 94950 |||| ||||| | ||| || |||| ||| || | ||||| || |||| | Sbjct 11978 GACATCTTCGAGACCATCTACTACGCTGCCGTGGAGTCGTCCGTGGACCTGGCTG---CC 12034 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGG-ATCGCC--CTTGGAACAGGGCATTTTTCAG 95007 | || || || |||| | ||| || | | || || ||| ||| || | ||| Sbjct 12035 GTCGAGGGCCCCTACGAGACCTTCAAGGGCAGCCCCGCCTCGGA---GGGTATGCTGCAG 12091 Query 95008 TTCGACCTCTGGGGTGTGAAGCCCTCG---GGTCTGTACGACTGGGAAGCTCT----ACG 95060 |||||||| ||| | || ||| | || | | ||||||| || || | | Sbjct 12092 TTCGACCTGTGGCACGAGACGCCGAAGAGCGGCCGCTGGAACTGGGACGCGCTGAAAAAG 12151 Query 95061 CGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGC 95120 ||| || | | ||| || ||| ||||||| | || || |||||||| || Sbjct 12152 CGC----GTCGTGGAGGTCGGCATGCGCAACTCGCTGCTGCTCGCGCCGATGCCCACCGC 12207 Query 95121 CTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTA 95180 ||| ||| ||||||| ||||| |||||||||| ||||| ||||||||||||||| | || Sbjct 12208 CTCGACGTCGCAGATTCTTGGGAACAACGAGTGCTTCGAGCCCTTCACCTCCAACATCTA 12267 Query 95181 CAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT 95240 | | || ||||| ||| || ||||||||| |||||||| ||||| | |||||| Sbjct 12268 CGTGCGCCGTGTGCTAAGCGGCGAGTTCCCCGTCGTCAACAAGTACCTCGTGATGGACCT 12327 Query 95241 GACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTC 95300 | | ||| | ||| | |||||| || ||| | | | | |||||| || Sbjct 12328 CATCAAGCGCGGTCTCTGGAGCGACAAGATCCGCAACGAGATCATCACCTTCAACGGGTC 12387 Query 95301 CGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGA 95360 ||| |||||| | | | || ||||||||| | | ||| ||| ||||||||||| Sbjct 12388 CGTGCAGAACGTGATGGACATCCCGGAGGACCTGCGCGAGCTGTACCGCACCGTGTGGGA 12447 Query 95361 GATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGG 95402 |||| |||||||| | ||||| |||||||||||||| Sbjct 12448 GATCTCGCAGCGCACCCTCATCGACATGGCGGCCGCCCGCGG 12489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494678180188800