Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq235 217 2e-51 >seq235 Length=15629 Score = 217 bits (240), Expect = 2e-51 Identities = 517/773 (67%), Gaps = 34/773 (4%) Strand=Plus/Plus Query 136645 TAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGG 136704 ||||||||||| ||||| | || ||||| || | ||||| || ||| || Sbjct 6243 TAGCCCTTCACACAGAGAATCTGATTGAGTACTGCCACCACCTCCACCAGCTCCGATTGC 6302 Query 136705 GCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCG 136764 || | |||||| ||||| || ||||||||||| || |||| || | ||| |||||| Sbjct 6303 GCGTGCATGACAGCGTCAATATCCTTGTAGGCAGCTGGTGTTTCATCCAGCACACCAGCG 6362 Query 136765 TCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAG-GTCGC 136823 |||||||||||||||||||||| || || | ||||| |||| |||||| |||| Sbjct 6363 TCCTTGCGGCACTCCACGCCCTGCGTCGCGGCCACGTGGTCAGCCAGCGTGAAGCGTCG- 6421 Query 136824 CTTGGCCTGGGTCC-GCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGT 136882 ||| | || | || || | || ||| || || |||||||| || |||||| | | Sbjct 6422 CTTCGTCTCGCCCCTGCTGTAGCG-CCGCCCTGCACCGTGCGAACAGGAGCAGTAGCTGC 6480 Query 136883 CCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCC 136942 ||| ||||| || |||||||| |||||| || |||||||| || ||||||| Sbjct 6481 TCGCGTTGCCTTTCCCGCGCACAATGTAGCTGAGCGCACCCATCGACCCCGGGATGACGG 6540 Query 136943 CGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTC-G 137001 | | || | ||| || ||||| || || |||||||| | | ||| |||| | | Sbjct 6541 CAAGCTCGCCCTGCTTGGCCGAAGTGGCCCCTTTGCGGGTGAGCCACACCGCCTCGCCAG 6600 Query 137002 AAGTGGAATTC--------CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTT-- 137051 | || | | | || |||||||||||||||||||||||||| | | | Sbjct 6601 ACGTCTCGTCCACCACGAACCGCTCCACGTAGTTGTGGTGGCAGTTCACCGCATGCGTAC 6660 Query 137052 -GTCCGTCTTGA-----ACGGCGGCAGGCCCGACGC-CCGCATGGCCTCCAGGACCCGGA 137104 |||| || || ||| | ||| | ||| |||| ||| || ||||| Sbjct 6661 CGTCCACCTGGAAGGTGACGTTCGGAGGGAGGGCGCGGCGCACGGCGTCGAGGACAAACT 6720 Query 137105 CCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGT 137164 ||||||| | ||||| | ||| | || |||| | || |||| | || Sbjct 6721 CCATCATGAGGCGCCGGTTCCACATGGCGTACGTTTGCGCCCACTCCACCGCTTGAATGT 6780 Query 137165 AGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGC 137224 | || | ||| | || | ||| ||| | || ||||||| ||||||| || | | Sbjct 6781 ACTCCTTGAAGTGCGCCGTGCCCTCGGAAAGGTAAGCAAGATCCTTGTGGGGCAG--GGA 6838 Query 137225 GCCCGTCACGACGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGT 137284 | ||| | ||| ||| | || ||| |||| || || ||| ||||||| || Sbjct 6839 GTGGATCAGGTCGC-CCATGTCTTTCTGCGCCATCTCAATATAGGTGCTGCCGATGCGGT 6897 Query 137285 TGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCT---------GGTCCT 137335 |||||| |||||||||||| ||||| ||||| ||||| ||| ||| |||| | Sbjct 6898 TGCCGATGCCGCGCGAGCCGGAGTGCAGCATGACCCACACGTGCTTTTGGACGGGGTCGT 6957 Query 137336 CGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGG 137388 ||||||||||| |||||||||||||| |||| ||| || ||||| || ||| Sbjct 6958 TATCGAGGCAGACTTCGATGAAGTGGTTCCCGCTGCCAAGCGTGCCGAGATGG 7010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690081196896000