Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq235 203 5e-47 >seq235 Length=15629 Score = 203 bits (224), Expect = 5e-47 Identities = 514/773 (66%), Gaps = 34/773 (4%) Strand=Plus/Plus Query 135405 TAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGG 135464 ||||||||||| ||||| | || ||||| || | ||||| || ||| || Sbjct 6243 TAGCCCTTCACACAGAGAATCTGATTGAGTACTGCCACCACCTCCACCAGCTCCGATTGC 6302 Query 135465 GCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCG 135524 || | |||||| ||||| || ||||||||||| || |||| || | ||| |||||| Sbjct 6303 GCGTGCATGACAGCGTCAATATCCTTGTAGGCAGCTGGTGTTTCATCCAGCACACCAGCG 6362 Query 135525 TCCTTACGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAG-GTCGC 135583 ||||| |||||||||||||||| || || | ||||| |||| |||||| |||| Sbjct 6363 TCCTTGCGGCACTCCACGCCCTGCGTCGCGGCCACGTGGTCAGCCAGCGTGAAGCGTCG- 6421 Query 135584 CTTGGCCTGGGTCC-GCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGT 135642 ||| | || | || || | || ||| || || |||||||| || |||||| | | Sbjct 6422 CTTCGTCTCGCCCCTGCTGTAGCG-CCGCCCTGCACCGTGCGAACAGGAGCAGTAGCTGC 6480 Query 135643 CCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCC 135702 ||| ||||| || |||||||| |||||| || |||||||| || ||||||| Sbjct 6481 TCGCGTTGCCTTTCCCGCGCACAATGTAGCTGAGCGCACCCATCGACCCCGGGATGACGG 6540 Query 135703 CGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTC-G 135761 | | || | ||| || ||||| || || |||||||| | | ||| |||| | | Sbjct 6541 CAAGCTCGCCCTGCTTGGCCGAAGTGGCCCCTTTGCGGGTGAGCCACACCGCCTCGCCAG 6600 Query 135762 AAGTGGAATTC--------CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTT-- 135811 | || | | | || |||||||||||||||||||||||||| | | | Sbjct 6601 ACGTCTCGTCCACCACGAACCGCTCCACGTAGTTGTGGTGGCAGTTCACCGCATGCGTAC 6660 Query 135812 -GTCCGTCTTGA-----ACGGCGGCAGGCCCGACGC-CCGCATGGCCTCCAGGACCCGGA 135864 |||| || || ||| | ||| | ||| |||| ||| || ||||| Sbjct 6661 CGTCCACCTGGAAGGTGACGTTCGGAGGGAGGGCGCGGCGCACGGCGTCGAGGACAAACT 6720 Query 135865 CCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGT 135924 ||||||| | ||||| | ||| | || |||| | || |||| | || Sbjct 6721 CCATCATGAGGCGCCGGTTCCACATGGCGTACGTTTGCGCCCACTCCACCGCTTGAATGT 6780 Query 135925 AGTCGTGGAACTCCGGTTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGC 135984 | || | ||| | || ||| ||| | || ||||||| ||||||| || | | Sbjct 6781 ACTCCTTGAAGTGCGCCGTGCCCTCGGAAAGGTAAGCAAGATCCTTGTGGGGCAG--GGA 6838 Query 135985 GCCCGTCACGCCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATACGGCCGATGGTGT 136044 | ||| | ||| ||| | || ||| |||| || || | | ||||||| || Sbjct 6839 GTGGATCAGGTCGC-CCATGTCTTTCTGCGCCATCTCAATATAGGTGCTGCCGATGCGGT 6897 Query 136045 TGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCT---------GGTCCT 136095 |||||| |||||||||||| ||||| ||||| ||||| ||| ||| |||| | Sbjct 6898 TGCCGATGCCGCGCGAGCCGGAGTGCAGCATGACCCACACGTGCTTTTGGACGGGGTCGT 6957 Query 136096 CGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGG 136148 ||||||||||| |||||||||||||| |||| ||| || ||||| || ||| Sbjct 6958 TATCGAGGCAGACTTCGATGAAGTGGTTCCCGCTGCCAAGCGTGCCGAGATGG 7010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700381059523200