Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq235 172 8e-38 >seq235 Length=15629 Score = 172 bits (190), Expect = 8e-38 Identities = 448/673 (67%), Gaps = 34/673 (5%) Strand=Plus/Plus Query 137304 TTTCGTCGATCACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGT 137363 |||| || | ||| || ||||||||||||||||||||||||| || || | |||| Sbjct 6343 TTTCATCCAGCACACCAGCGTCCTTGCGGCACTCCACGCCCTGCGTCGCGGCCACGTGGT 6402 Query 137364 CCTCCAGAGTGAAG-GTCGCCTTGGCCTGGGTCC-GCGACATCGTCCGGCCCGCGCCGTG 137421 | |||| |||||| ||||| || | || | || || | || ||| || || ||||| Sbjct 6403 CAGCCAGCGTGAAGCGTCGC-TTCGTCTCGCCCCTGCTGTAGCG-CCGCCCTGCACCGTG 6460 Query 137422 CGAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCC 137481 ||| || |||||| | | ||| ||||| || |||||||| |||||| || || Sbjct 6461 CGAACAGGAGCAGTAGCTGCTCGCGTTGCCTTTCCCGCGCACAATGTAGCTGAGCGCACC 6520 Query 137482 CATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGT 137541 |||||| || ||||||| | | || | ||| || ||||| || || |||||||| Sbjct 6521 CATCGACCCCGGGATGACGGCAAGCTCGCCCTGCTTGGCCGAAGTGGCCCCTTTGCGGGT 6580 Query 137542 CACGAAGACCCACTCGTC-GAAGTGGAATTC--------CTTCTGGACGTAGTTGTGGTG 137592 | | ||| |||| | || || | | | || |||||||||||||| Sbjct 6581 GAGCCACACCGCCTCGCCAGACGTCTCGTCCACCACGAACCGCTCCACGTAGTTGTGGTG 6640 Query 137593 GCAGTTCACCGCTTCCTT---GTCCGTCTTGAACGG--CG---GCAGGCCCGACGCC-CG 137643 |||||||||||| | | | |||| || ||| | || | ||| | ||| || Sbjct 6641 GCAGTTCACCGCATGCGTACCGTCCACCTGGAAGGTGACGTTCGGAGGGAGGGCGCGGCG 6700 Query 137644 CATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCC 137703 || ||| || ||||| ||||||| | ||||| | ||| | || | Sbjct 6701 CACGGCGTCGAGGACAAACTCCATCATGAGGCGCCGGTTCCACATGGCGTACGTTTGCGC 6760 Query 137704 CCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAG 137763 ||| | || |||| | ||| || | ||| | || | ||| ||| | || ||||||| Sbjct 6761 CCACTCCACCGCTTGAATGTACTCCTTGAAGTGCGCCGTGCCCTCGGAAAGGTAAGCAAG 6820 Query 137764 GTCCTTGTCCAGCGGCTTGCGCCCGTCACGGCGCAGCATCATCTCCTTGGCCTTCTCGAT 137823 ||||||| || | | | ||| | ||| ||| | || ||| |||| || Sbjct 6821 ATCCTTGTGGGGCAGGGAGTGGA--TCAGGTCGCC-CATGTCTTTCTGCGCCATCTCAAT 6877 Query 137824 GAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGAC 137883 || ||| ||||||| |||||||| |||||||||||| ||||| ||||| ||||| || Sbjct 6878 ATAGGTGCTGCCGATGCGGTTGCCGATGCCGCGCGAGCCGGAGTGCAGCATGACCCACAC 6937 Query 137884 GCGCT---------GATCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAG 137934 | ||| | || | ||||||||||| |||||||||||||| |||| ||| || Sbjct 6938 GTGCTTTTGGACGGGGTCGTTATCGAGGCAGACTTCGATGAAGTGGTTCCCGCTGCCAAG 6997 Query 137935 GGTGCCCAGTTGG 137947 ||||| || ||| Sbjct 6998 CGTGCCGAGATGG 7010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709657015334400