Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq235 172 8e-38 >seq235 Length=15629 Score = 172 bits (190), Expect = 8e-38 Identities = 442/663 (67%), Gaps = 34/663 (5%) Strand=Plus/Plus Query 136078 CACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGT 136137 ||| || ||||||||||||||||||||||||| || || | ||||| |||| || Sbjct 6353 CACACCAGCGTCCTTGCGGCACTCCACGCCCTGCGTCGCGGCCACGTGGTCAGCCAGCGT 6412 Query 136138 GAAG-GTCGCCTTGGCCTGGGTCC-GCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAG 136195 |||| ||||| || | || | || || | || ||| || || |||||||| || ||| Sbjct 6413 GAAGCGTCGC-TTCGTCTCGCCCCTGCTGTAGCG-CCGCCCTGCACCGTGCGAACAGGAG 6470 Query 136196 CAGAACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCG 136255 ||| | | ||||||||| || |||||||| |||||| || |||||||| || Sbjct 6471 CAGTAGCTGCTCGCGTTGCCTTTCCCGCGCACAATGTAGCTGAGCGCACCCATCGACCCC 6530 Query 136256 GGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACC 136315 ||||||| | | || | ||| || ||||| || || |||||||| | | ||| Sbjct 6531 GGGATGACGGCAAGCTCGCCCTGCTTGGCCGAAGTGGCCCCTTTGCGGGTGAGCCACACC 6590 Query 136316 CACTCGTC-GAAGTGGAATTC--------CTTCTGGACGTAGTTGTGGTGGCAGTTCACC 136366 |||| | || || | | | || |||||||||||||||||||||||| Sbjct 6591 GCCTCGCCAGACGTCTCGTCCACCACGAACCGCTCCACGTAGTTGTGGTGGCAGTTCACC 6650 Query 136367 GCTTCCTT---GTCCGTCTTGAACGG--CG---GCAGGCCCGACGCT-CGCATGGCCTCC 136417 || | | | |||| || ||| | || | ||| | ||| |||| ||| || Sbjct 6651 GCATGCGTACCGTCCACCTGGAAGGTGACGTTCGGAGGGAGGGCGCGGCGCACGGCGTCG 6710 Query 136418 AGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACG 136477 ||||| ||||||| | ||||| | ||| | || |||| | || Sbjct 6711 AGGACAAACTCCATCATGAGGCGCCGGTTCCACATGGCGTACGTTTGCGCCCACTCCACC 6770 Query 136478 GCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCC 136537 |||| | ||| || | ||| | || | ||| ||| | || ||||||| ||||||| Sbjct 6771 GCTTGAATGTACTCCTTGAAGTGCGCCGTGCCCTCGGAAAGGTAAGCAAGATCCTTGTGG 6830 Query 136538 AGCGGCTTACGCCCGTCACGGCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGG 136597 || | | ||| | ||| ||| | || ||| |||| || || ||| | Sbjct 6831 GGCAGGGAGTGGA--TCAGGTCGCC-CATGTCTTTCTGCGCCATCTCAATATAGGTGCTG 6887 Query 136598 CCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCT----- 136652 |||||| |||||||| |||||||||||| ||||| ||||| ||||| ||| ||| Sbjct 6888 CCGATGCGGTTGCCGATGCCGCGCGAGCCGGAGTGCAGCATGACCCACACGTGCTTTTGG 6947 Query 136653 ----GGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGT 136708 |||| | ||||||||||| |||||||||||||| |||| ||| || ||||| || Sbjct 6948 ACGGGGTCGTTATCGAGGCAGACTTCGATGAAGTGGTTCCCGCTGCCAAGCGTGCCGAGA 7007 Query 136709 TGG 136711 ||| Sbjct 7008 TGG 7010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701299375948800