Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq235 107 5e-19 >seq235 Length=15629 Score = 107 bits (118), Expect = 5e-19 Identities = 208/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 37174 ACCCGCAAAGGTGCTG-TTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTCGAT 37232 ||||||||||| || ||||| | || ||||||| || | | ||||||| || ||||| Sbjct 6580 ACCCGCAAAGGGGCCACTTCGGCCAAGC-AGGGCGAGCTTGCCGTCATCCCGGGGTCGAT 6522 Query 37233 GGGTGCGAAGTCA--TTCATCGTTCGCGGCAAGGGAAATTCC-GAATCGTTCTGCTCTTG 37289 ||||||| ||| | ||| || ||||| || || || | | | | | |||||| || Sbjct 6521 GGGTGCGC--TCAGCTACATTGTGCGCGGGAAAGGCAACGCGAGCAGC-TACTGCTCCTG 6465 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 |||||||| || || ||| ||| ||| | || || || ||||| | | Sbjct 6464 TTCGCACGGTGCAGGGCGGCGCTACAGCAGGGGCGAGACGAAGCGACGCTTCACGCTGGC 6405 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 || || | ||| || || | || | ||||||||||| || || | ||| | || || Sbjct 6404 TGACCACGTGGCCGCGACGCAGGGCGTGGAGTGCCGCAAGGACGCTGGTGTGCTGGATGA 6345 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 || ||||| || |||||||| || || || |||||| ||||||||| | |||||||| Sbjct 6344 AACACCAGCTGCCTACAAGGATATTGACGCTGTCATGCACGCGCAATCGGAGCTGGTGGA 6285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139271158967360