Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq303 98.7 1e-15 >seq303 Length=13852 Score = 98.7 bits (108), Expect = 1e-15 Identities = 288/439 (66%), Gaps = 6/439 (1%) Strand=Plus/Minus Query 151601 TCTTCAACGCGTTTCATAAATATATCCGGAACCCATAATGCGTTCATCAAATCACGCGCT 151660 |||||| |||| ||||| || | ||| || | ||| | |||| | || || ||||| Sbjct 11417 TCTTCA-CGCGCTTCATGAACAGATCGGGGATCCAGAGCGCGTAGAACAGGTCGCGCGCA 11359 Query 151661 TTGGTGTCTTCGCTGCCAATGTTTCGACGCATGTGTAAAACGTCCATAATGTCGCAATGC 151720 ||| || |||| |||| || |||| | | || || | ||||| ||| Sbjct 11358 CGCTGGTCGTCCTTGCCGGTGTTGCGCTTCATGAGCAGAAACTCGAAGATGTCCGCGTGC 11299 Query 151721 CACGGTTCAACGTACACTGCTTGGGCGCCTTTTCGCTT---GCCACCTTGATCCACGTGA 151777 ||||| || | ||||| || ||| || || ||||| ||| || |||||||||| Sbjct 11298 CACGGCTCGAGGTACATGGCGAAGGCACCCTTGCGCTTACCGCCGCCCTGATCCACGTAG 11239 Query 151778 CGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCGGTGCCGTTCGTA 151837 || || ||||||| | || || | ||| || | || ||| ||| ||||||||||| Sbjct 11238 CGGGCCGTATTATTCCACACACGGATCATCGGCATGAGGCCGTTGGACGTGCCGTTCGTG 11179 Query 151838 GATTTTATTTTGCTG-TTGCGGCCGCGTACGCTGTTCACGTTCAATCCAATACCGCCGCC 151896 || | |||| |||| | || | | ||| ||||| | ||||| |||||| | Sbjct 11178 CCGGCGATGTAGCTGCCCGCGG-CACGGATGTTGTGCACGTGGATGCCAATGCCGCCGGC 11120 Query 151897 GTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGAATGCTATCGCT 151956 | || ||||| |||||| || || | |||| |||||||| |||||| || Sbjct 11119 GGCCTTGCTGATCACGGCGCACTCCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCATC 11060 Query 151957 TTCCATGGTCAATAGAAAACATGAACTCATCTGCGGTGTCAGAGTGCCGGCAGCGAACAT 152016 | ||| | || || || || || |||||||| || | | |||||||| ||| | Sbjct 11059 CTTCATCGCCACCAGGAAGCACGAGCTCATCTGGGGCTTGGGGGTGCCGGCGTTGAAGAG 11000 Query 152017 GGTTGGGCTTGCGTGCGTG 152035 ||| || | || || ||| Sbjct 10999 GGTGGGTGTCGCATGGGTG 10981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488499542496000