Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2024 210 3e-49 >seq2024 Length=3994 Score = 210 bits (232), Expect = 3e-49 Identities = 433/640 (68%), Gaps = 8/640 (1%) Strand=Plus/Plus Query 146876 TGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGT 146935 ||||| ||||||| | || || | | |||||| | ||| | ||||||||||| Sbjct 2261 TGAGCACGGGGAAGCGGCGCGGCACACGCGTCAGCTGCTCCTGCAGCGCCTCCACGTGGT 2320 Query 146936 TGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCA 146995 | ||||||||| || |||||||| |||||||| | || |||||||| || ||||| Sbjct 2321 TCTTGTAGACGTGAGCATCCCCCAGCGTGTGCACGAGCTCGCCCGGCTTGAGCCCGGTGG 2380 Query 146996 CGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGC 147055 | | ||| | || |||||| | | ||| ||| ||||| ||||| || || || | Sbjct 2381 CCTTGGCGATCAAAATGGTGAGGAAGGCGTACGAGGCGATGTTAAAGGGCACACCGAGCC 2440 Query 147056 CCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC-CCGT-----CGGCCACGT 147109 |||| || | | |||||| ||| ||| |||||| ||| | ||||| Sbjct 2441 CCATATCGCAACTGCGCTGGTATAGCATGCAGCTCAGCTCCTGCGTGTTCGTGTTCACGT 2500 Query 147110 AAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCC 147169 | ||||| | |||| |||||||||||| || ||||| | ||| | |||||||||| Sbjct 2501 AGAACTGCCCGAGGAGGTGGCACGGCGGGAGGGCCATCTTGTCCAGCGCGGCGGGGTTCC 2560 Query 147170 AGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 | || | || | |||||| | | | |||||| |||| | | |||| | | | Sbjct 2561 ACGCGGTGAAGAGCAGCCGGCGGTCGTTCGGGTTCGTCTTGAGCGTCTCGACGATGCGCT 2620 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAA 147289 | | ||| || ||||||| ||| ||||||| | || |||| |||||| | Sbjct 2621 TGATCTGATCGACGCCCTTGCCGTCGTAGTTCTCGTGGAAGGAGGTGTACTCGGCCCCGA 2680 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349 |||| | |||||||||||||||||| ||||| ||||| || ||||| || || Sbjct 2681 AGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCCATCTCCTCGTAGTGCGTGAGGC 2740 Query 147350 C-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408 | || | | | ||| || || || |||| | ||||||||||| || |||||| || Sbjct 2741 CGCGGCTG-TCGAGGAAGGCGCGGCTGCCGTTGTCGTCCCAGATGTGGACGCCCTTGTCG 2799 Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468 | |||| ||| | || || ||||| | |||||| | |||||||| | || || Sbjct 2800 GCGAGCAGCTTGGCGTTGGTCTCGCCCCTCAGGAACCAAATGAGCTCCTCGGAGACGCCG 2859 Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGT 147508 | ||| ||||| | ||| || || ||||| || | ||||| Sbjct 2860 CGCCAGAAGACGCGCTTCGTCGTGAGCAGCGGCAGCTGGT 2899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583434902592000