Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq303 196 6e-45 seq5767 131 2e-25 >seq303 Length=13852 Score = 196 bits (216), Expect = 6e-45 Identities = 1063/1671 (64%), Gaps = 50/1671 (3%) Strand=Plus/Minus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| ||||||||||| ||| ||||||| | | ||||| || | Sbjct 12612 CGGAGGTAGTACATGCCCGTCTTGAGACCCGACTTCCAGCAGTGGAAGTGCATGGACGTG 12553 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | || | | || || |||| |||||||||||| || || || || ||| | Sbjct 12552 ATCTGGCCCGACGAAGGGCTCTCCAGGAAGAGGTTCATCGACTGCGACTGGTCAATGTAC 12493 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016 || || | |||||||| || || | | | ||| |||||||| || | | Sbjct 12492 TTGCCGCGGGCGGCCGCCATGTCGATGAGGGTGCGCTGCGAGATCTCCCACACGGTGCGG 12433 Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076 || || | | || || ||||| |||| | || || | ||| |||| ||| Sbjct 12432 TACAGCTCGCGCAGGTCCTCCGGGATGTCCATCACGTTCTGCACGGA----CCCG--TTG 12379 Query 118077 ACCATGA-GATCC---TTCATATCCTTTGAC--CAGAGACCAATCTTTTTGAGATCCTCC 118130 | ||| |||| | | ||| | | | |||||||| ||| |||| ||| | Sbjct 12378 AAGGTGATGATCTCGTTGCGGATCTTGTCGCTCCAGAGACCGCGCTTGATGAGGTCCATC 12319 Query 118131 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190 ||||| | ||| ||||| || ||||| || || || | || ||||| ||| Sbjct 12318 ACGAGGTACTTGTTGACGACGGGGAACTCGCCGCTTAGCACACGGCGCACGTAGATGTTG 12259 Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATT-TGGGCTGTGGAGGCTGTGGG 118249 | ||| | ||||| |||||||| ||||| ||||||| | || | || ||||| ||||| Sbjct 12258 GAGGTGAAGGGCTCGAAGCACTCGTTGTT-CCCAAGAATCTGCGACGTCGAGGCGGTGGG 12200 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 ||| || || | || || ||| || | || ||| | ||| | || || || Sbjct 12199 CATCGGCGCGAGCAGCAGCGAGTTGCGCATGCCGACCTCCACGACGCGCTTTTTCAGCGC 12140 Query 118310 GTCCCAGTCGTAGTTGAG---CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 118366 |||||||| || | ||| | | | | ||||||| || ||||| || ||||| Sbjct 12139 GTCCCAGTTCCAGCGGCCGCTCTTCGGCGTCTCGTGCCACAGGTCGAACTGCAGCATACC 12080 Query 118367 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGA 118426 | || || || |||| || ||||| || |||||||| || | |||| || Sbjct 12079 CTCCGAGGCGGGGCTGCCCTTGAAGGTCTCGTAGGGGCCCTCGACGGCAGCCAGGTCCAC 12020 Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486 | || ||| | ||| |||| || || || || || ||| | || | || || Sbjct 12019 GGACGACTCCACGGCAGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTGAGACGCTGCGC 11960 Query 118487 CTCGTCGGAATCA--AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 118544 ||| ||| || || | || ||| || || | || ||||| || || || Sbjct 11959 CTC--CGGGCTCGTGAAGGGCAGGCGGAGCAGGCAGAAGGCGTCGGCGAGGCCCTGCACG 11902 Query 118545 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCG--GTCTCCACGGGATAAA 118602 || ||||| | ||||| | | ||| || || | | ||| ||||| ||||| || Sbjct 11901 CCAAGGCCGACGGGGCGGTTGCGCATGTTG--CTGCGGCGCGCCGTCTCGACGGGGTAGT 11844 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | |||| || || || | || || || ||||| |||| || | || | || Sbjct 11843 AGTTCCGGTCTATGACACGGTTCAGGTTGAAGGTGATCTCCTTCGTCACCTCGTACAGTA 11784 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722 | || || || | |||| ||| ||| |||| | | ||||| || |||| Sbjct 11783 GCTGGTGGTCGAACTCGTTCTTCTCGCGATTCACAAACTTGGACACCGCGATGGAGGCCA 11724 Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782 || ||||| | ||||| || || ||||| ||||| |||||||||| ||| | Sbjct 11723 AGTTGCACACCGCCGTCTCCTCGGGGGAGGTATACTCAATAATCTCCGTGCACAGGTTGG 11664 Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842 | | ||| |||||||| | ||||| || || ||||| ||| ||||| |||||||| | Sbjct 11663 AGCACTTGATGGTGCCGAGATTCTTCTGGTTGGACTTCTCGTTGCACGCGTCCTTGTACA 11604 Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG-GCA 118901 |||| | ||| || ||||| | ||||||| ||| || || ||||| || || Sbjct 11603 ACATGAACGGCACGCCTGTCTCGATCTGGGACTCGAGGATGGCGAACCAGAGCTCCTGCG 11544 Query 118902 GCTGGCACAGTGGCGTTGGCTC--GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAA 118959 |||| | ||| || || | |||| || ||||||| | |||||| || | Sbjct 11543 CCTGG-ATGGTG-CGCACGCCCATGCCCTTCG-CCTCGTAGTCCTCGTAGAGCTGCTCGA 11487 Query 118960 ACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA-T 119018 ||| || || | || ||| || || | | | | ||| | | | ||| | Sbjct 11486 ACTTCTCGCCGTAGCAGTCGCTGAGGCCGGGCGTCGTGTTGGGGTCCATCAACGTCCACT 11427 Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGA 119078 || || | ||| ||| | ||||||||||| || || |||||||||||||| |||| || Sbjct 11426 TGCCCTCGCTCTTCA-CGCGCTTCATGAACAGATCGGGGATCCAGAGCGCGTAGAACAGG 11368 Query 119079 TCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 || || || ||| || || | || ||| | || || ||| || | || Sbjct 11367 TCGCGC--GCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCATGAGCAGAAACTCGAAGA 11310 Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCT 119193 | |||||||||||||| || ||||||| |||| | ||||| || || || ||| Sbjct 11309 TGTCCGCGTGCCACGGCTCGAGGTACATGGCGAAGGCACCCTTGCGCTTACCGCCGCCCT 11250 Query 119194 GGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATT 119253 | | || || | || || || | ||||| | ||| || |||| || | ||| Sbjct 11249 GATCCACGTAGCGGGCCGTATTATTCCACACACGGATCATCGGCATGAGGCCGTTGGACG 11190 Query 119254 GGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACC 119311 ||| || || || ||| || | | ||| | || | ||| | ||| || || Sbjct 11189 TGCCGTTCGTGCCGGCGATGTAGCTGCCCGC--GGCACGGATGTTGTGCACGTGGATGCC 11132 Query 119312 AATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATC 119371 ||| || || || ||| ||| ||||||||| |||| || ||||||| || || Sbjct 11131 AATGCCGCCGGCGGCCTTGCTGATCACGGCGCACTCCTTGAGCGTGTCGTAGATGCCCTC 11072 Query 119372 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA---CATTTGAGGCCTGGGTGT 119428 || |||| |||| | || | |||||||| ||| ||| || ||| |||| || Sbjct 11071 AATGCTGTCATCCTTCATCGCCACCAGGAAGCA---CGAGCTCATCTGGGGCTTGGGGGT 11015 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 119479 || ||||||||||| || |||||||| ||| |||| | || |||||||| Sbjct 11014 GCCGGCGTTGAAGAGGGTGGGTGTCGCATGGGTGAAGAAGCCCTGGGACAT 10964 >seq5767 Length=966 Score = 131 bits (144), Expect = 2e-25 Identities = 352/528 (67%), Gaps = 14/528 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || ||| ||||||||||||||| ||||| ||| | ||| ||||||| Sbjct 35 TACTCGCCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCGGTGAGCGAGATCATCTCCATG 94 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | ||| | | || | | || | | ||| || || Sbjct 95 AAGTCGAAGGGGTTGGTGGCGTTGTAGTGCTTCTCGAGC-CCGAGCGACACGAGCAGGCG 153 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| ||| |||| |||||| ||||||||| || Sbjct 154 GTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGGCGTTCATGCCGATGAGGCG-CA 212 Query 129907 TGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 ||| |||||||| |||||||| ||||||| ||| | || || || | ||||||| Sbjct 213 CGGGCAGCGCGTCGCAGATGAACTCCTTCTCGATGACGACGGCGTCGGTGATGATGGCGA 272 Query 129966 GAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTCCACGGCAAA 130020 | | | ||| || | ||| || ||| | || ||| |||| ||| || Sbjct 273 GCACGCGCTCGCGGGGCAG--CTTGTGCTTGATGTGGCTGTTGTAGAGCAGGCAGGCGAA 330 Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080 || ||| || |||||||| || |||||||| || || |||| || || ||||| Sbjct 331 GTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTGAAGGTGAGCCCGGGCAT 390 Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140 | || |||||||| | |||||| || | || || ||||| ||||||||||| ||||| Sbjct 391 CACGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCGGAGAAGAAGATGCCCTC 450 Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTT 130200 || ||||| | | ||| ||||| |||||| | | | || | | ||| Sbjct 451 GACGGCGGCGAAGCCGATGAGGCGCTCCTGGAAGGAG-GCGCCGCTG--CCGATCCAGCG 507 Query 130201 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 || ||||| | ||||| |||| ||| || |||| ||||||||| || Sbjct 508 CACGGCCCAGTTGGCCTTCTTCTGGATGCAGGGGATGGTCTGGATGGC 555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618378922396800