Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5767 105 8e-18 seq139 91.5 2e-13 seq3519 86.0 7e-12 >seq5767 Length=966 Score = 105 bits (116), Expect = 8e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| ||| ||| || || || ||||| ||||||||||| || ||||||||| | Sbjct 477 GAGCGCCTCATCGGCTTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCTCC 418 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 || | |||||||||||||| || | ||||| || ||| |||| ||||||||| ||| Sbjct 417 ATCTTCTGGCTCAAGAAGCGCGGCGTGATGCCCGGGCTCACCTTCAGCAACGAGCTCATC 358 Query 94924 TCTCGTGACGAGGGACTCCAC 94944 || || |||||||| || ||| Sbjct 357 TCGCGCGACGAGGGCCTGCAC 337 >seq139 Length=19434 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 169122 CCAACTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGT 169181 ||| |||||| || ||||||||| | ||||||| ||||| |||||| || || |||| Sbjct 16325 CCACCTTGAGCAGGTCCGGCCAGAAGCAATGAATCAAATTGATAATGAGCCCTTTAATGT 16384 Query 169182 GGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGC 169234 |||| || |||| ||| ||| | ||||||||||||| | ||||| || ||| Sbjct 16385 GGGAGCCATCGTAATCTTGATCGGACATGATCATGAGATGGCCATAGCGGAGC 16437 >seq3519 Length=2121 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 94843 TTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTC 94902 ||||| || ||||||||| | || | |||||||||||||| || | ||||| || ||| Sbjct 2121 TTCTCCGGCTCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGTGGCGTGATGCCCGGGCTC 2062 Query 94903 TGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||| ||||||||| ||||| || |||||||| || ||| Sbjct 2061 ACCTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTGCAC 2020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583207723267200