Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2024 154 1e-32 >seq2024 Length=3994 Score = 154 bits (170), Expect = 1e-32 Identities = 395/603 (66%), Gaps = 15/603 (2%) Strand=Plus/Plus Query 29643 TCCT-CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAAC 29701 |||| ||||| |||||||||| ||||||||||||||| ||||| ||||| || | | Sbjct 2299 TCCTGCAGCGCCTCCACGTGGTTCTTGTAGACGTGAGCATCCCCCAGCGTGTGCACGAGC 2358 Query 29702 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 29761 || ||||| | ||||||||| | | || |||| ||||||| | ||| |||| Sbjct 2359 TCGCCCGGCTTGAGCCCGGTGGCCTTGGCGATCAAAATGGTGAGGAAGGCGTACGAGGCG 2418 Query 29762 ATGTTAAAGGGCACCCCGAGCCCCATGTCCC--CTGACCTCTGGTAGAGCTGGCACGAGA 29819 |||||||||||||| ||||||||||| || | ||| | |||||| ||| ||| | Sbjct 2419 ATGTTAAAGGGCACACCGAGCCCCATATCGCAACTG--CGCTGGTATAGCATGCAGCTCA 2476 Query 29820 GCT-CTCCGT-----CGCTCACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCA 29873 ||| || ||| | ||||||| ||||| | | | |||||||| || ||||||| Sbjct 2477 GCTCCTGCGTGTTCGTGTTCACGTAGAACTGCCCGAGGAGGTGGCACGGCGGGAGGGCCA 2536 Query 29874 TGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGT 29933 | ||| | ||||||||| || | || | || | ||| | ||||| Sbjct 2537 TCTTGTCCAGCGCGGCGGGGTTCCACGCGGTGAAGAGCAGCCGGCGGTCGTTCGGGTTCG 2596 Query 29934 TCCTGATGAGGTCCACG--GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGN 29991 || ||| || ||| ||| || | |||||| || ||| | || ||||| Sbjct 2597 TCTTGAGCGTCTCGACGATGCGCTT--GATCTGATCGACGCCCTTGCCGTCGTAGTTCTC 2654 Query 29992 NNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAG 30051 |||| || | ||||||||| ||||||||||| || || Sbjct 2655 GTGGAAGGAGGTGTACTCGGCCCCGAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAG 2714 Query 30052 GTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 30111 ||| ||| || |||| || ||| | |||| | ||| | | | |||||| | Sbjct 2715 GTCCATCTCCTCGTAGTGCGTGAGGCCGCGGCTGTCGAGGAAGGCGCGGCTGCCGTTGTC 2774 Query 30112 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 30171 ||||||||| | || ||||| |||| |||| |||| ||| || || || | ||| Sbjct 2775 GTCCCAGATGTGGACGCCCTTGTCGGCGAGCAGCTTGGCGTTGGTCTCGCCCCTCAGGAA 2834 Query 30172 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30231 ||| | |||||||| |||| | ||| ||||| | ||| |||||||| || || | Sbjct 2835 CCAAATGAGCTCCTCGGAGACGCCGCGCCAGAAGACGCGCTTCGTCGTGAGCAGCGGCAG 2894 Query 30232 CTG 30234 ||| Sbjct 2895 CTG 2897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406127163170080