Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20galati_20[genbank_20GCA_5F000482125.1_202013-10-25] 7,280 sequences; 27,235,000 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq2024 107 1e-18 >seq2024 Length=3994 Score = 107 bits (118), Expect = 1e-18 Identities = 145/199 (73%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 829 GAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGA 888 |||||| || ||||||||| ||||||| | ||| |||||||||||||| |||| | | Sbjct 2970 GAAGGAGGACCGCACCGGCGTCGGCACGATCAGCCAGTTCGGCGCCCAGATGCGCTTCTC 2911 Query 889 CCTCACCGAGGGC---TTCCCGCTGGTCACCACGAAGCGCGTCCACT-TCAAATCGGTTG 944 |||| ||| | | |||||| |||| |||||||||||| || | || | Sbjct 2910 CCTCCGCGACAACCAGCTGCCGCTGCTCACGACGAAGCGCGTCTTCTGGCGCGGCGTCTC 2851 Query 945 CGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACG 1004 || | || || | |||||||| || ||||| || |||| ||| |||| |||||| | Sbjct 2850 CG-AGGAGCTCATTTGGTTCCTGAGGGGCGAGACCAACGCCAAGCTGCTCGCCGACAAGG 2792 Query 1005 GCGTCACCATCTGGGACGA 1023 ||||| |||||||||||| Sbjct 2791 GCGTCCACATCTGGGACGA 2773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296104925759280