Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3593 187 3e-42 >seq3593 Length=2243 Score = 187 bits (206), Expect = 3e-42 Identities = 410/610 (67%), Gaps = 21/610 (3%) Strand=Plus/Plus Query 145689 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTC 145748 |||||||||||| ||| ||||| ||||| || ||| ||| | || || ||||| | Sbjct 326 CTCCACGTGGTTCTTGTAAACGTGGGCGTCGCCGAGGGTGTGCACGAGCTCGCCGGGTTG 385 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 ||| || ||| | |||| | | |||||| | || |||| ||| |||||||| || Sbjct 386 GAGCCCGGTGGCCTTCGCGATGAGGATGGTCAGGAAGGCGTAGGAGGCGATGTTGAACGG 445 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG- 145867 ||| || || |||||||| | ||||||||||||| |||| |||| || || | Sbjct 446 CACGCCGAGGCCCATGTCGCAGCTGCGCTGGTACAGCATGCAGCTCAGCT-CCTGCGTGT 504 Query 145868 ------CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGT 145921 |||||||||||| | ||||||||||| ||||| || ||||| | ||| Sbjct 505 TTGTGTTCACGTAGAACTGCCCGAGGAGGTGGCACGGCGGGAGCGCCATCTTGTCCAGCG 564 Query 145922 CCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCC 145981 | || |||||||| ||||||| || ||||| | | | |||||| | | | | Sbjct 565 CGGCGGGGTTCCACGCGGTGAAGAGGAGCCGGCGGTCGTTCGGGTTCGACCGCAGCGTCT 624 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTC-TTGGAGTCCACG 146040 | | | | | ||| |||||| ||||| | || ||| | | || || | | Sbjct 625 CGACGATGCGCTTGATCTGGTCGACGCCTTTGCCATCGTAGT-TCTCGCGGGCGGAGGTG 683 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC----CCGGG 146096 ||| |||| |||||||| | ||||||||| ||||| ||||| || |||||| | | | Sbjct 684 TACTCGGCTCCGAAGTGGCGCCACTGGAAGCCGTACACGGGGCCGAGGTCCATCTCGGCG 743 Query 146097 CTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGAT 146156 | | ||| || ||| | | |||| ||| | ||| |||||| |||||||||| Sbjct 744 TTTTCGGTG----AGGCCGCGGCTGTCGAGAAAGGCGCGGCTGCCGTTGTCGTCCCAGAT 799 Query 146157 CTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAG 146216 | |||||| ||| |||| || | ||| || || | | ||||| | || Sbjct 800 GTGCACGCCCGCGTCGGCGAGCAGCTTCGCGTCGGTCTCGCCGCGCAGAAACCAAATGAG 859 Query 146217 CTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTG---GCC 146273 ||| ||| |||||| | ||||||||| | ||| || |||||||| || | ||| | | Sbjct 860 CTCCTCGGAGACCCCTCGCCAGAAGACGCGCTTCGTCGTCAGCAGCGGCAGCTGGTTGTC 919 Query 146274 CCGCAGGGAG 146283 ||||||||| Sbjct 920 GCGCAGGGAG 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590013174969040