Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq3593 152 4e-32 >seq3593 Length=2243 Score = 152 bits (168), Expect = 4e-32 Identities = 400/599 (67%), Gaps = 26/599 (4%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || |||||||| ||||||||||||||||| || | ||||||||| | || || || Sbjct 327 TCCACGTGGTTCTTGTAAACGTGGGCGTCGCCGAGGGTGTGCACGAGCTCGCCGGGTTGG 386 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || || ||| | | ||||| || ||||||| ||||||| ||||||||| ||||| Sbjct 387 AGCCCGGTGGCCTTCGCGATGAGGATGGTCAGGAAGGCGTAGGAGGCGATGTTGAACGGC 446 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC-----C 21105 || ||||||||||||||| | | |||||||||| |||| ||||||| | Sbjct 447 ACGCCGAGGCCCATGTCGCAGCTGCGCTGGTACAGCATGCAGCTCAGCTCCTGCGTGTTT 506 Query 21106 GAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164 | | |||||| ||||| | | | ||| || || ||||| |||||| | || | Sbjct 507 GTGTTCACGTAGAACTGCCCGAGGAGGTGGCACGGCGGGAGCGCCATCTTGTCCAGCGCG 566 Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGAT 21222 ||||||||||||||| | | || || || |||| ||| || | | || Sbjct 567 GCGGGGTTCCACGCGGTGAAGAGGAGCCGGCGGTCGTTCGGGTTCGACCG-----CAGCG 621 Query 21223 CCACCACGTAACGC---AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCC 21279 | | ||| ||| | |||||| || || | || |||||||| || ||| Sbjct 622 TCTCGACGATGCGCTTGATCTGGTCGACGCCTTTGCCATCGTAGTTCTCGCGGGCGGAGG 681 Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGC 21339 ||||||| || || || || | ||||||||| |||||||| || || || | || || | Sbjct 682 TGTACTCGGCTCCGAAGTGGCGCCACTGGAAGCCGTACACGGGGCCGAGGT--CCATCTC 739 Query 21340 GGCGGTCCCCG-AAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAAT 21397 |||| | | | || || || | | | |||||||||| |||| ||||||| || Sbjct 740 GGCGTTTTCGGTGAGGCCGCGGCTGTCGAGAAAGGCGCGGCTGCCGTTGTCGTCCCAGAT 799 Query 21398 TTTTACG-CCGCGGC-GCGA-CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAG 21454 | ||| ||||| | |||| ||| | | | |||||| ||| | | |||||| | Sbjct 800 GTGCACGCCCGCGTCGGCGAGCAGCT---TCGCGTCGGTCTCGCCGCGCAGAAACCAAAT 856 Query 21455 CAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGT 21513 | |||||| ||| || | ||| || || | || || || | ||| || | || || Sbjct 857 GAGCTCCTCGGAGACCCCTCGCCAGAAGACGCGCTTCGTCGTCAGCAGCGGCAGCTGGT 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427731028176480