Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1671 208 2e-48 >seq1671 Length=4299 Score = 208 bits (230), Expect = 2e-48 Identities = 1116/1755 (64%), Gaps = 71/1755 (4%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| || ||||||||||| ||| | ||||||| || ||||| ||||| || ||| Sbjct 2026 ATTGTCGAGCGCCCGCAGCACATGATTCTGCGTGTGGCGATTGGCATCCACGGCAAGGAC 2085 Query 363502 GTTGATGCCGCGATTGAAACA--TATAAGCT----TCTAAGTGCTCGTGTATTCACGCAC 363555 | || ||| | | || || | || || || ||| | ||||| ||| Sbjct 2086 CTCGA--CCGTGTGCGCCGCACGTACACCCTCATGTCGCAGGGCT----TCTTCACCCAC 2139 Query 363556 GCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT 363615 || || || || | | ||| || || || | ||| || |||||| || ||||| || Sbjct 2140 GCGACCCCGACGCTCTTCAACGCCGGCACCCCTAAGCCGCAGATGAGCTCCTGCTTCCTC 2199 Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675 | ||||||||||| ||| ||||| |||| ||||| || ||| | ||||| | Sbjct 2200 GTGGCGATGAAGGACGACAGCATTGAGGGCATCTACGACACGCTCAAGGAGTGTGCGGTG 2259 Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGTATCGA--TCCACAATGTTCGTGCACAGAACA 363733 || |||| || ||||| || || ||| | | ||||| | || || || Sbjct 2260 ATCAGCAAGGCCGCCGGCGGCATCGGC--ATCCACGTGCACAACATCCGCGCCGCCGGCA 2317 Query 363734 GTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTG 363793 | |||||| |||||| || || || || || | || ||| | || |||| Sbjct 2318 GCTACATTGCCGGCACCAACGGCACGTCCAACGGCCTCATGCCGATGATCCGCGTGTGGA 2377 Query 363794 ACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGT 363853 |||| || || | |||||||||||||| || || |||||||| || || || || |||| Sbjct 2378 ACAACACGGCCCGCTACGTCGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCGATGT 2437 Query 363854 ATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA---AACACGG 363910 | |||||||| || ||||| | || ||||| || ||| ||| ||||||| Sbjct 2438 ACCTCGAGCCGTGGCACGCCGACGTCTTCGAGTTCCT---GCTGATGAAGCGCAACACGG 2494 Query 363911 GAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTA 363970 | || || || ||| || || || || ||||| || || ||| | | |||| || | Sbjct 2495 GCAAGGACGACCAGCGCGCGCGCGACCTCTTCTACGCCCTGTGGATCCCCGACCTCTTCA 2554 Query 363971 TGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCC--ACACGAATGTCCA 364026 |||||||||| || || | | || ||| | || | ||| |||| | || Sbjct 2555 TGAAGCGCGTCAAG--AGCGAGGGCAAGTGGACGCTGATGGACCCCAACACCACC--CCG 2610 Query 364027 GGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAG 364086 || || ||| | || || || | | || ||||| | || || || Sbjct 2611 GGCCTCAGCGACTGCTACGGCGAGGAGTTCGAGAAGCTTTACGAGGACTACGAGGCGCGC 2670 Query 364087 GGAAAGGCTCGTAAG-ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 || | || ||| | || || | || ||| |||| ||||| |||||||| || || || Sbjct 2671 GGCATGGG-CGTCCGCACCATCCAGGCGCAGGAGCTCTGGTTCGCCATCATCGAGTCCCA 2729 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 ||| ||||| || |||| ||||||||||| || | |||||| ||||| ||||| Sbjct 2730 GATCGAGACGGGCGTGCCCTTCATGTTGTACAAGGACGCCTGCAACGAGAAGTCGAACCA 2789 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 | || ||||||| || || || |||||| || ||||||||||| || |||||| | Sbjct 2790 GAAGAACCTTGGCACCATCAAGTGCTCCAACCTGTGCACCGAGATTATCGAGTACACCTC 2849 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGA 364325 || || ||||| || || || ||||| || || |||||| | | |||||| | Sbjct 2850 GCCGGAGGAGACGGCGGTGTGCAACCTGGCCTCCATCGCGGTGTCCAAGTTTGTGGACCG 2909 Query 364326 TG----GTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAA 364379 | | || || |||||||||| || || || || || | | || ||| Sbjct 2910 CGCGAAGAACGAGTTCGACCACCAGCTGCTGTACGAGGTGACGAAGGAGATCACGCTCAA 2969 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG---CGTTCTAA 364436 || || || || ||| ||| || || || | ||| ||| | || || Sbjct 2970 CCTGAACCGCGTCATTGACCGGAACTACTACCCCGT---CGAAACCGCGCGCCGCAGCAA 3026 Query 364437 TATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT 364496 ||||| | |||||| | || || || || ||||||||||| |||| || |||| Sbjct 3027 CATGCGCAACCGCCCGGTCGGCCTCGGCGTGCAGGGCCTCGCGGACGCCTTCTGCCTGCT 3086 Query 364497 CAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAAT 364556 | || | || || || || | || || |||| ||||| || || || Sbjct 3087 CCGCCTGCCCTTCACCAGCCCGGAGGCGCAGCAGCTCAACGAGGACATCTTCGAGACCAT 3146 Query 364557 GTATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTA 364615 || | ||||| | || | || |||| || |||| ||||| |||| | Sbjct 3147 TTACTACGCCGCCGTGGAGTCCTCCGTG-GACCTGGCCGCGGTGGAGGGACCGTACGAGA 3205 Query 364616 CTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC 364675 | | ||| ||| || |||| | ||||||| || || ||| | | |||| Sbjct 3206 CCTTCAAGGACAGCCCCGCCTCAAAGGGCCAGCTCCAGTTCGACCTGTGGCACGAGACGC 3265 Query 364676 C----ATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTAC 364730 | | | | ||| ||||||||||| | || | | | ||| || || | Sbjct 3266 CGAAGAGC-GGCCGCTGGAACTGGGACGCCCTCAAGAAGC-GCGTCGTCGAGGTCGGCAT 3323 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 |||||||| || | ||||| |||||||| || || || | ||||||||||| || Sbjct 3324 GCGCAACTCGCTGCTCCTCGCGCCGATGCCCACAGCCTCGACCTCGCAGATCCTCGGCAA 3383 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 ||||||||||||||| || || || ||| | || ||||| || || ||| || Sbjct 3384 CAACGAGTGCTTCGAGCCCTTCACCTCCAACATCTACGTCCGCCGCGTGCTGAGCGGCGA 3443 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 || || || || || |||||||| || | || || | | || || |||||| | || Sbjct 3444 GTTCCCCGTGGTGAACAAGTACCTGGTGACCGACCTCATCAAGCGGGGCCTGTGGAGCGA 3503 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT-TCCAGGA-TTT 364968 || || |||| | |||||| || || || ||||||||| ||| | ||| | Sbjct 3504 CAAAATCCGGAACGAGATCATCACCTTCAACGGGTCTGTGCAG--CATGTGATGGACATC 3561 Query 364969 CCAGAAGATCTG---AAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTC 365025 || || || ||| ||| | ||| ||||| ||||| || || ||| || ||| Sbjct 3562 CCCGAGGACCTGCGCGAGC---TGTACCGCACCGTGTGGGAGATCTCGCAGCGCACCCTC 3618 Query 365026 ATTGATATGGCGGCCGATCGCG----GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGT 365081 || || |||||||||| |||| || | || | | ||| |||||| | ||| | Sbjct 3619 ATCGACATGGCGGCCGCCCGCGGCAAGTACATTGACCAGTC----GCAGTCGATGAACCT 3674 Query 365082 ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATC 365141 ||| | | || | ||| | | || | || || ||||| ||| || | |||| || Sbjct 3675 CTTCCTCGAGAACCCCAACTCGGGCCAGATCACGTCGATGCACTTCCACTGCTGGAGGTC 3734 Query 365142 CGGTCTTAAGACAGG 365156 ||| || ||||| || Sbjct 3735 CGGGCTCAAGACGGG 3749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303209552545532