Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4029 152 1e-31 >seq4029 Length=1979 Score = 152 bits (168), Expect = 1e-31 Identities = 294/431 (68%), Gaps = 7/431 (2%) Strand=Plus/Plus Query 243295 GAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCC 243354 ||||| ||| ||| || | | || || || || | || ||||| ||||||||| Sbjct 1015 GAGCGCCTCATCGGCTTCGCGGCGGTCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCC 1074 Query 243355 ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATC 243414 ||||| ||||| ||| || |||||||| |||||| | |||||| ||||| Sbjct 1075 ATCTTCTGGCTCAAGAAGCGCGGCGTGATGCCCGGCCTCACCTTCAGCAACGAGCTCATC 1134 Query 243415 AGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA-AGC----TCC 243469 |||||||||||||| ||| | |||| || | || ||| ||| || Sbjct 1135 TCGCGCGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTCTA--CAACAGCCACATCA 1192 Query 243470 AGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAA 243529 || ||||||| || ||| || |||||||| || || || | | ||| | Sbjct 1193 AGCACAAGCTCCCGCGCGACCGCGTGCTCGCCATCATCACCGACGCCGTCGTCATCGAGA 1252 Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589 |||| ||||| |||||||| | || || || || ||||||||| | || |||||| Sbjct 1253 AGGAGTTCATCTGCGACGCGCTGCCGGTGCGTCTGATCGGCATGAACGCCGAGCTCATGA 1312 Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649 | ||||||||||| ||||| ||||||||| | || | |||| || ||||| | Sbjct 1313 GCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTGTCGCTCGGCCTCGAGAAGCACT 1372 Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709 ||||||||| ||||||||| | ||| |||||| | || ||||| || || || |||| Sbjct 1373 ACAACTCCACGAACCCCTTCGACTTCATGGAGATGATCTCGCTCACCGGCAAGACCAACT 1432 Query 243710 TCTTCGAAAAG 243720 ||||||| ||| Sbjct 1433 TCTTCGAGAAG 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102758109013100