Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1671 219 4e-52 seq4029 172 5e-38 seq2387 93.3 4e-14 seq8454 89.7 5e-13 seq6152 89.7 5e-13 seq70 87.8 2e-12 >seq1671 Length=4299 Score = 219 bits (242), Expect = 4e-52 Identities = 591/882 (67%), Gaps = 43/882 (5%) Strand=Plus/Minus Query 153593 CACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGA 153651 ||| || || || ||||| || || || |||||||| || |||| | |||||| | | Sbjct 2892 CACCGCGATGGAGGCCAGGTTGCACACCGCCGTCTCCTCCGGCGAGG-TGTACTCGATAA 2834 Query 153652 TCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATT-GCTTTTGCGA 153710 |||||| ||| |||||| ||| || ||| ||| | || | ||| || | || || Sbjct 2833 TCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCAAGGTTCTTCTGGTTCGACTTCTCG- 2775 Query 153711 TTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA 153770 ||||| ||||| ||| | | |||| | || |||| ||||||| || | |||| ||| Sbjct 2774 TTGCAGGCGTCCTTGTACAACATGAAGGGCACGCCCGTCTCGATCTGGGACTCGATGATG 2715 Query 153771 ---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCG--GCC-CTCGCTCTCG 153824 |||| || |||||||| | | | ||| || | ||| | ||| |||| Sbjct 2714 GCGAACCAGAGC---TCCTGCGCCTGGAT--GGTGCGGACGCCCATGCCGCGCGC-CTCG 2661 Query 153825 TATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCC-GGGACACTG 153883 || |||||| || ||| ||||| ||||||||||||||| |||||| ||| || Sbjct 2660 TAGTCCTCGTAAAGCTTCTCGAACTCCTCGCCGTAGCAGTCGCTGAGGCCCGGGGTGGTG 2601 Query 153884 ATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGG 153943 || || | |||||||| |||| | | ||| |||||||| |||||| || || || Sbjct 2600 TTGGGGTC-CATCAGCGTCCACTTGCCCTCGCTCTTGACGCGCTTCATGAAGAGGTCGGG 2542 Query 153944 CACCCAGAGCGCGTACATGAGGTCGCGCGC---CTTGCAATCCTCCGCGCCCATGTTGCG 154000 | ||| || ||||| | |||||||||||| || | || ||| |||| ||||||| Sbjct 2541 GATCCACAGGGCGTAGAAGAGGTCGCGCGCGCGCTGG---TCGTCCTTGCCCGTGTTGCG 2485 Query 154001 TTTCAGATTGAGCACGCTAT---AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAG 154057 |||| | |||| | | ||| |||||||||||| || || | ||| | || | Sbjct 2484 CTTCA---TCAGCAGGAACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTACATCGCGAA 2428 Query 154058 GGCACCTTTACGCTTTCCGCC---CTGATCGACGTGGCGCACCATATTGTTGAAGACGCG 154114 ||| || || ||||| ||||| ||| ||||||| ||| || | ||||| | ||||| Sbjct 2427 GGCGCCCTTGCGCTTACCGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTCCACACGCG 2368 Query 154115 CACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGC 154174 | ||| || |||||| | | ||||||||||| || | ||||||| ||| Sbjct 2367 GATCATCGGCATGAGGCCGTTGGACGTGCCGTTGGTGCCGGCAATGTAGCTGCCGGCGGC 2308 Query 154175 GCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTT--TGATATGGCAGCGCAG 154232 ||| | | ||||||| | ||| ||||||||| || ||| |||| || |||| Sbjct 2307 GCGGATGTTGTGCACGTGGATGCCGATGCCGCCGGCGGCCTTGCTGAT----CACCGCAC 2252 Query 154233 TCGCC--CAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGA-CGCCGAGCAAGAAA 154289 | || ||||| ||||||||| || ||||| ||||| | |||| | | ||| Sbjct 2251 ACTCCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCGTCCTTCATCGCC-ACGAGGAAG 2193 Query 154290 CACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTA 154349 || || | ||| ||||| | | || || || ||||| || || ||||||| || Sbjct 2192 CAGGAGCTCATCTGCGGCTTAGGGGTGCCGGCGTTGAAGAGCGTCGGGGTCGCGTGGGTG 2133 Query 154350 AACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGA 154409 || | || ||| | | |||||| | | |||| || | |||||| Sbjct 2132 AAGAAGCCCTGCGACATGAGGGTGTACGTGCGGCGCACACGGTCGAGGTCCTTGCCGTGG 2073 Query 154410 ATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCG 154451 ||||| | ||| || |||| | |||||||||||| || ||| Sbjct 2072 ATGCCAATCGCCACACGCAGAATCATGTGCTGCGGGCGCTCG 2031 >seq4029 Length=1979 Score = 172 bits (190), Expect = 5e-38 Identities = 304/443 (69%), Gaps = 0/443 (0%) Strand=Plus/Plus Query 52395 GAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCC 52454 |||||| | | | |||||| ||||||||| | || || |||||| ||| |||| Sbjct 1015 GAGCGCCTCATCGGCTTCGCGGCGGTCGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCC 1074 Query 52455 ATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATA 52514 ||||| | | || | | ||| | ||||||||||| || |||||||||||| | || Sbjct 1075 ATCTTCTGGCTCAAGAAGCGCGGCGTGATGCCCGGCCTCACCTTCAGCAACGAGCTCATC 1134 Query 52515 TCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACC 52574 ||||||||||| || |||||||| ||||| || ||||| |||||| | | | | | Sbjct 1135 TCGCGCGACGAGGGCCTGCACACCGACTTCGCCTGCCTGCTCTACAACAGCCACATCAAG 1194 Query 52575 GAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAG 52634 | || | ||| | || ||| ||| || || || | ||||| ||| Sbjct 1195 CACAAGCTCCCGCGCGACCGCGTGCTCGCCATCATCACCGACGCCGTCGTCATCGAGAAG 1254 Query 52635 GAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGC 52694 ||||| | | |||||||||||| ||| | ||||||||||| || |||| || Sbjct 1255 GAGTTCATCTGCGACGCGCTGCCGGTGCGTCTGATCGGCATGAACGCCGAGCTCATGAGC 1314 Query 52695 GAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTC 52754 ||||||||||||| || || || || ||| | ||| |||||| | ||| ||| | Sbjct 1315 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTGTCGCTCGGCCTCGAGAAGCACTAC 1374 Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814 ||| | || || || || || ||| | | || ||||| |||||||||||||| Sbjct 1375 AACTCCACGAACCCCTTCGACTTCATGGAGATGATCTCGCTCACCGGCAAGACCAACTTC 1434 Query 52815 TTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||| ||||||||||| Sbjct 1435 TTCGAGAAGAAGGTCGGCGAGTA 1457 >seq2387 Length=3272 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| |||| || | || | | ||||||||||| ||||||||||| Sbjct 332 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCCGCG 273 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 272 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 213 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||| ||| ||||||| Sbjct 212 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 153 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||| || || ||||| || || || || |||||||| ||| Sbjct 152 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATAGCT 102 >seq8454 Length=528 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 301 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 242 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 241 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 182 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| ||| |||||| Sbjct 181 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCAC 122 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | ||| || || ||||| || || || || ||||||||| Sbjct 121 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 73 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 528 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 469 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 468 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 409 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||| ||| ||||||| Sbjct 408 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 349 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||| || || ||||| || || || || ||||||||| Sbjct 348 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 301 >seq6152 Length=1087 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 1043 GCCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 984 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 983 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 924 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | |||||| ||| |||||| Sbjct 923 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCAC 864 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | || | ||| || || ||||| || || || || |||||||| ||| Sbjct 863 CTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATAGCT 812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| |||| || | || | | |||||||| || ||||||||||| Sbjct 251 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 192 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| |||| || ||||| |||||||| || Sbjct 191 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 132 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||| ||| ||||||| Sbjct 131 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 72 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||| || || ||||| || || || || ||||||||| Sbjct 71 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 24 >seq70 Length=16190 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||| || || || |||| Sbjct 16167 GACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCG 16108 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 16107 AAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACG 16048 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| ||| ||||||||| | || | ||| || || ||||| || || Sbjct 16047 TTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTC 15988 Query 138601 ACAAAAATCTGCATGGCT 138618 || || |||||||| ||| Sbjct 15987 ACGAAGATCTGCATAGCT 15970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496208890506720