Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1671 194 2e-44 seq4029 118 1e-21 seq1892 87.8 2e-12 >seq1671 Length=4299 Score = 194 bits (214), Expect = 2e-44 Identities = 846/1318 (64%), Gaps = 34/1318 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||| | ||||| |||||||| ||||| || | ||| || | || ||| Sbjct 3419 TAGATGTTGGAGGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCGAG 3360 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 ||||||||||| || || | ||| || |||||| | || ||| | | ||| | | Sbjct 3359 GCTGTGGGCATCGGCGCGAGGAGCAGCGAGTTGCGCATGCCGACCTCGACGACGCGCTTC 3300 Query 116023 TTGAGGGCGTCCCAGT---CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGG 116079 |||||||||||||||| | | | ||| | | | | | ||||| || |||||| Sbjct 3299 TTGAGGGCGTCCCAGTTCCAGCGGCCGCTCTTCGGCGTCTCGTGCCACAGGTCGAACTGG 3240 Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 || || | || || || ||| || ||||| || || ||||| ||| | ||| Sbjct 3239 AGCTGGCCCTTTGAGGCGGGGCTGTCCTTGAAGGTCTCGTACGGTCCCTCCACCGCGGCC 3180 Query 116140 AATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 116196 | | ||||| | ||| | ||| |||| || || ||||| || ||| | || Sbjct 3179 AGGTCCACGGAG---GACTCCACGGCGGCGTAGTAAATGGTCTCGAAGATGTCCTCGTTG 3123 Query 116197 ATTGCCTTGGCCTCGTCGGAAT--CAAACGCGAGACGGCACAAAATAAATACATCCGCGA 116254 | || ||||| ||| | || | || ||| || || | ||||||| Sbjct 3122 AGCTGCTGCGCCTC--CGGGCTGGTGAAGGGCAGGCGGAGCAGGCAGAAGGCGTCCGCGA 3065 Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 116314 | || || || |||||||| | ||||| | | ||| || || ||||| || | Sbjct 3064 GGCCCTGCACGCCGAGGCCGACCGGGCGGTTGCGCATGTTGCTGCGGCGCGCGGTTTCGA 3005 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 |||| || | |||| || || || | || || || |||| |||| || | | Sbjct 3004 CGGGGTAGTAGTTCCGGTCAATGACGCGGTTCAGGTTGAGCGTGATCTCCTTCGTCACCT 2945 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 116434 | | ||| | || || || | || | | ||| |||| | | |||| Sbjct 2944 CGTACAGCAGCTGGTGGTCGAACTCGTTCTTCGCGCGGTCCACAAACTTGGACACCGCGA 2885 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 | || ||||| || ||||| | ||||| ||| |||||||| ||||| || || | Sbjct 2884 TGGAGGCCAGGTTGCACACCGCCGTCTCCTCCGGCGAGGTGTACTCGATAATCTCGGTGC 2825 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 ||| || || | ||| |||||||| | |||||| || || ||||| ||| || || | Sbjct 2824 ACAGGTTGGAGCACTTGATGGTGCCAAGGTTCTTCTGGTTCGACTTCTCGTTGCAGGCGT 2765 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 ||||||| | ||| | ||| |||||||| | ||||||| || || || ||| | Sbjct 2764 CCTTGTACAACATGAAGGGCACGCCCGTCTCGATCTGGGACTCGATGATGGCGAACCAGA 2705 Query 116615 -CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC-CTCCTCGTACTTTGTGTAGAG 116672 | | ||| |||| | || ||| || | || | | ||||||| | ||| || Sbjct 2704 GCTCCTGCGCCTGG-ATGGT-GCGGACGCCCATGCCGCGCGCCTCGTAGTCCTCGTAAAG 2647 Query 116673 GGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 ||| ||||| || || ||| | ||||| |||| || | | | || | Sbjct 2646 CTTCTCGAACTCCTCGCCGTAGCAGTCGCTGAG-GCCC-GGGGTGGTGTTGGGGTCCATC 2589 Query 116731 AGAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGC 116789 || | ||| ||| || | || || || ||||||||||||||||| |||||||| || || Sbjct 2588 AGCGTCCACTTGCCCTCGCT-CTTGACGCGCTTCATGAAGAGGTCGGGGATCCACAGGGC 2530 Query 116790 CGAGAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 ||||||| || || ||| ||| || || | ||| ||| | || | || Sbjct 2529 GTAGAAGAGGTCGCG--CGCGCGCTGGTCGTCCTTGCCCGTGTTGCGCTTCATCAGCAGG 2472 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---A 116904 || || | || || ||||||||||| || ||||||| ||||| | |||||||| | Sbjct 2471 AACTCGAAGACGTCGGCGTGCCACGGCTCGAGGTACATCGCGAAGGCGCCCTTGCGCTTA 2412 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 | || |||||| || || | ||||| ||| | ||||| | ||| || |||| Sbjct 2411 CCGCCGCCCTGGTCGACGTAGCGGGCCGTGTTGTTCCACACGCGGATCATCGGCATGAGG 2352 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT--TGTTGGCTCTGACATCGTGGA 117022 || | || ||| || || || ||| | || | ||| | || | ||| | Sbjct 2351 CCGTTGGACGTGCCGTTGGTGCCGGCAAT--GTAGCTGCCGGCGGCGCGGATGTTGTGCA 2294 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 ||| || || || || || || ||| ||| || |||||| |||| || ||| Sbjct 2293 CGTGGATGCCGATGCCGCCGGCGGCCTTGCTGATCACCGCACACTCCTTGAGCGTGTCGT 2234 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 |||| || || || ||| |||| | || | |||||||||| ||| || ||| Sbjct 2233 AGATGCCCTCAATGCTGTCGTCCTTCATCGCCACGAGGAAGCAGGAGCTCATCTGCGGCT 2174 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 117200 | || || || ||||||||||| || || ||||||||| |||| | || || ||||| Sbjct 2173 TAGGGGTGCCGGCGTTGAAGAGCGTCGGGGTCGCGTGGGTGAAGAAGCCCTGCGACAT 2116 >seq4029 Length=1979 Score = 118 bits (130), Expect = 1e-21 Identities = 291/434 (67%), Gaps = 13/434 (3%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || |||||| ||||||||||||||| ||||| || ||| ||| ||||||| Sbjct 1458 GTACTCGCCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCGGTGAGCGAGATCATCTCCAT 1399 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAGGAGAC 127349 || || || |||||| | ||||| | | || | | || | | ||| || | Sbjct 1398 GAAGTCGAAGGGGTTCGTGGAGTTGTAG-TGCTTCTCGAGGCCGAGCGACACGAGCAGGC 1340 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | || | |||| |||| ||||||| ||| ||| | |||||| ||||| || Sbjct 1339 GGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGGCGTTCATGCCGATCAGACGCA 1280 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 || |||||||| |||||||| ||||||| ||| | || || || | ||||||| Sbjct 1279 CCGGCAGCGCGTCGCAGATGAACTCCTTCTCGATGACGACGGCGTCGGTGATGATGGCGA 1220 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTC----TTGAAGAGTTCCA--CAG-CA 127522 | | ||| | | | || ||| | | || ||| |||| || ||| | Sbjct 1219 GCACGCGGTCG-CGCGGGAGCTTGTGCTTGATGTGGCTGTTGTAGAG---CAGGCAGGCG 1164 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| || |||||||| || |||||||| || || |||| || || ||| Sbjct 1163 AAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTGAAGGTGAGGCCGGGC 1104 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || | || |||||||| | |||||| || || || || ||||| ||||||||||| ||| Sbjct 1103 ATCACGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGATGCCC 1044 Query 127643 TCCACACACGCGAA 127656 || || |||||| Sbjct 1043 TCGACCGCCGCGAA 1030 >seq1892 Length=3957 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 12695 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 12754 |||||| || || ||||| || | |||| |||||||| ||| ||||| || ||||||| Sbjct 2375 GATCTTGCGGTCGAAGCGGCCGGAGCGGGTGAGGGCGTTGTCGAGGATGTCCGTGCGGTT 2434 Query 12755 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTC 12805 ||||||||||| || | |||||||| ||| | |||||| |||| ||| Sbjct 2435 CGTCGCCGCGAGCACGATGATGCCCGAGGCGTCCTTGAAGCCGTCCAGCTC 2485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613441048586160