Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq4029 336 2e-87 seq990 147 2e-30 seq5997 143 3e-29 seq2387 141 9e-29 seq8454 140 3e-28 seq6152 140 3e-28 seq70 134 1e-26 >seq4029 Length=1979 Score = 336 bits (372), Expect = 2e-87 Identities = 541/768 (70%), Gaps = 16/768 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| ||||| || || || ||||| ||||| ||||| || || || || || || Sbjct 1476 CATGACGCCCGCCTTCTGGTACTCGCCGACCTTCTTCTCGAAGAAGTTGGTCTTGCCGGT 1417 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 | || || | | ||| || || |||||||| | | |||||||||||| | ||| Sbjct 1416 GAGCGAGATCATCTCCATGAAGTCGAAGGGGTTCGTGGAGTTGTAGTGCTTCTCGAGGCC 1357 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || | | | |||||||| | |||||| |||||||||||||| || |||| ||| Sbjct 1356 GAGC--GAC-ACGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGGC 1300 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGA 132826 || | || | |||||||||||||||||| ||| || ||| | || ||||||| ||| Sbjct 1299 GTTCATGCCGATCAGACGCACCGGCAGCGCGTCGCAGATGAACTCCTT-CTCGATGACGA 1241 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGT-TGCACCAAATGC--- 132882 | |||||||||| ||| | ||||| | ||||| | | | ||| | || Sbjct 1240 CGGCGTCGGTGATGATGGCGAGCACGCG-GTCGCGCGGGAGCTTGTGCTTGATGTGGCTG 1182 Query 132883 TTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTG 132942 ||| | | || ||| || |||||| |||| ||||||||| | || ||||| |||||| Sbjct 1181 TTGTAGAGCAGGCAGGCGAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTG 1122 Query 132943 CTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTG 133002 ||||| || | ||||||||| | |||||| || |||||||| || |||||| ||| | Sbjct 1121 CTGAAGGTGAGGCCGGGCATCACGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAG 1062 Query 133003 CCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCT 133062 || || ||||||| ||||||||| |||||||| | | |||||||| ||| |||| Sbjct 1061 CCGGAGAAGAAGATGCCCTCGACCGCCGCGAAGCCGATGAGGCGCTCCTGGAAGCTGGCG 1002 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | |||| |||||||||||| ||||| ||||| | | || |||||| || || Sbjct 1001 CC---GCTGCCGATCCAGCGCACGGCCCAGCTCGCCTTCTTCTGGATGCACGGGATGGTC 945 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGG 133182 | ||||||| || || || || ||||| | | | ||||||||||| || Sbjct 944 TGCATGGCGTGCAGCAGGCGCAGCTTCTCGGCGCTGTCGGTGATGTAGGTGTCGAGCAGC 885 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||| || | || ||||| | ||||||||| || || |||||||| ||| ||| Sbjct 884 ACCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGAGCTGGAAGCCGTAGAAGGCGCGC 825 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCG 133302 |||||| |||| || || ||| ||| || | || || ||| |||||||||| Sbjct 824 GCCTCGGGGACCTTGACGTCGGTCATGAAGCGCACGGCGAGGTTCTCGACGACGATGCCG 765 Query 133303 TCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCG 133350 |||||| ||||||| ||||| ||||||||||||||||| || ||||| Sbjct 764 TCGCTGCCGGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGCTGCTCG 717 >seq990 Length=6061 Score = 147 bits (162), Expect = 2e-30 Identities = 175/232 (75%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || ||||| || ||||| || ||| || |||| |||||||| Sbjct 487 AAGATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCCCTCGAGGTCGAGGCG 546 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | ||||| | | |||| | || | || |||| ||||| ||||| || ||||||| Sbjct 547 AGCGACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGG 604 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||| Sbjct 605 ACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACACTCGCGGACT 664 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||||| |||||||||| | |||||||| || | ||||| Sbjct 665 ACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCGCCTGCGCGGCGG 716 >seq5997 Length=1133 Score = 143 bits (158), Expect = 3e-29 Identities = 167/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || ||||| || ||||| || ||| || |||| |||||||| Sbjct 365 AAGATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCCCTCGAGGTCGAGGCG 424 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | ||||| | | |||| | || | || |||| ||||| ||||| || ||||||| Sbjct 425 AGCGACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGG 482 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| || || | ||| ||||| |||||||| || | ||||| ||| |||| Sbjct 483 ACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACT 542 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| ||||| |||||||||| | |||||||| Sbjct 543 ACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCG 582 >seq2387 Length=3272 Score = 141 bits (156), Expect = 9e-29 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 106 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 165 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 166 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 223 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 224 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 283 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| |||||||||| |||||||||| || | ||||| Sbjct 284 ACATCCAAAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 332 >seq8454 Length=528 Score = 140 bits (154), Expect = 3e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 74 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 133 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 134 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 191 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 192 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 251 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| |||||||||| |||||||||| || | |||||| Sbjct 252 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 301 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 302 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 361 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 362 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 419 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 420 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 479 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||||||||| |||||||||| || | ||||| Sbjct 480 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 528 >seq6152 Length=1087 Score = 140 bits (154), Expect = 3e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 816 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 875 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 876 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 933 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 934 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 993 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| ||||| |||||||||| |||||||||| || | |||||| Sbjct 994 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 1043 Score = 138 bits (152), Expect = 1e-27 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 25 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 84 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 85 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 142 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 143 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 202 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||||||||| |||||||||| || | ||||| Sbjct 203 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 251 >seq70 Length=16190 Score = 134 bits (148), Expect = 1e-26 Identities = 163/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 15974 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 16033 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 16034 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 16091 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 16092 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 16151 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| |||||||||| |||||||||| Sbjct 16152 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 16188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500118868867840