Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2897 352 4e-92 seq1212 197 2e-45 seq1773 168 8e-37 seq1562 150 2e-31 >seq2897 Length=2733 Score = 352 bits (390), Expect = 4e-92 Identities = 768/1141 (67%), Gaps = 13/1141 (1%) Strand=Plus/Plus Query 7013 CCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATC 7072 || || | |||| ||| || |||| ||| ||||| ||||| ||||| |||||||| || Sbjct 1441 CCGGTCAGGATGAAGGCCTGCACCGCCGCGCCGTAGGCGACGGCCTCGTCGGGGTTGATG 1500 Query 7073 GTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATT 7132 | || ||||| || || ||| || || || || | | || | || ||||| Sbjct 1501 CTCTTGTTCAGCTCCTTGCCGCCGAAGTAGTCGGAGACGAGGCTCTGCACCTTGGGGATG 1560 Query 7133 CGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT 7192 || || || || ||||| | || | || | ||| || || ||||| | || Sbjct 1561 CGGGTGGAGCCGCCGACGAGCACTACGTCGTGCACGGCGCGCTTGTCCATCTTGGCATCG 1620 Query 7193 CGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCA 7252 || ||||| || | || ||||||| | ||| ||||| ||||| Sbjct 1621 GTGAGCACGCGCTCGACGGGCTGCACGGTGCTACGGAAGAGGTCGCCGCACAGCTCCTCG 1680 Query 7253 AAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCA 7312 || || || ||||| |||| | | ||| || | | |||| | | | || || || Sbjct 1681 AAGCGGGCGCGGGTGATGGTGGACTGGAAGTCGATGTTGTCGAAGAGGGCGTCGATCTCG 1740 Query 7313 ATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAA 7372 ||||| | || | | || || | || ||||| |||||||| || || || || | Sbjct 1741 ATGGTGGCCTGGGTGGCGGACGAGAGGGTGCGCTTGGCGCGCTCGCAGGCGGTGCGCAGG 1800 Query 7373 CGACGAAGGGCACGCGGGTTACCGGAAATATCTTT---CTTATGTTTACGTTTAAACTCT 7429 || || ||||| || |||| |||| | || || ||| | || || || ||||| Sbjct 1801 CGGCGCAGGGCGCGGTGGTTGCCGGCGAGGTCCTTGCCCTTGTTCTTGCGCTTGAACTCG 1860 Query 7430 TCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 || | |||| || || | || | ||||| || |||||||| | ||| ||||| || Sbjct 1861 TCGGCGAAGAAGTTGACG-AGGCGGTTGTCGAAGTCCTCACCACCGAGGTGGGTATCGCC 1919 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 |||||| || ||||| || ||||| || || || || | | || | ||||| ||||| Sbjct 1920 CGCGGTGGCCTTGACCTCGAAGATGCCGCCGTCGATCGTGAGCAGGGTCACATCGAACGT 1979 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 ||| || || ||||| || ||||| |||||| | || | ||| | | ||| ||||| || Sbjct 1980 ACCGCCGCCGAGGTCGAAGATGAGCACGTTCTTCTCCTTGTCGTCGCCCTTGTCGAGGCC 2039 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC-AGGCCAGCAA 7667 ||||||||| || || || || || || || || || || || || || ||||| || | Sbjct 2040 GTACGCGATGGCGGCGGCGGTGGGCTCGTTGATGATGCGGAG-CACCTCGAGGCCGGCGA 2098 Query 7668 TAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTA 7727 | || | || || || || || || || || || ||||| |||||||| ||||| || | Sbjct 2099 TCGTGCCGGCGTCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCGGGGACGGTGA 2158 Query 7728 CGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAA 7787 |||| || | | |||| | ||| ||||| || | || ||| | || ||||| ||| | Sbjct 2159 CGACGGCCTTCTTGACCTGCTTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTGAGGA 2218 Query 7788 GAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTT 7847 | ||||| || | ||| || | | || || || || |||| || || || | Sbjct 2219 GCACCATGGAGCTGACCTCCTCGGGGGTGAAGGTCTTGGTCTCGCCGTGGAACTCCACCT 2278 Query 7848 CAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907 | | ||| | ||| | || || ||||| | | ||| | ||||| ||| Sbjct 2279 GCACGACGGGGAGGT-CGC--CCTTGGAGACGACCTTGAAGGGCCAGTGCTTCATGTCGC 2335 Query 7908 CTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGT 7967 ||||||| |||| ||||| | ||||| || ||||| || || || || |||| Sbjct 2336 TCTGGACCTCGGAGTCCTTGAACTTGCGGCCGATGAGGCGCTTCGCGTCGAAGACGGTGT 2395 Query 7968 TTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTT 8027 | | |||||||||||| ||||||||||| ||||| ||||| ||||| || | | Sbjct 2396 TGTGGGGGTTCATGGCAACCTGGTTCTTCGCGGCGTCGCCGATCAGACGCTC---AGAGT 2452 Query 8028 CCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTA 8087 | || || |||||||| || |||||||| || || || |||||||||||||| || || | Sbjct 2453 CGGTGAAGGCGACGTAGGAGGGGGTCGTGCGGTTGCCCTGGTCGTTCGCAATGATCTCCA 2512 Query 8088 CGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTG 8147 |||| ||||| ||||| ||||| ||||| || || || || || | ||||||||| || | Sbjct 2513 CGCGCTCGTTCTGCCACACGCCCACGCAGGAGTAGGTCGTGCCCAGATCAATACCAATAG 2572 Query 8148 C 8148 | Sbjct 2573 C 2573 >seq1212 Length=5313 Score = 197 bits (218), Expect = 2e-45 Identities = 340/491 (69%), Gaps = 6/491 (1%) Strand=Plus/Minus Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717 ||||| || || || | || || || || || || || || || ||||| |||||||| Sbjct 5302 AGGCCGGCGATCGTGCCGGCGTCCTTGGTGGCCTGGCGCTGGGAGTCGTTGAAGTAGGCG 5243 Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777 ||||| || ||||| || | | |||| | ||| ||||| || | || ||| | || ||| Sbjct 5242 GGGACGGTGACGACGGCCTTCTTGACCTGCTTGCCGAGGTAGGCCTCAGCGGTCTCCTTC 5183 Query 7778 ATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTA 7837 || ||| || ||||| || | ||| || | | || || || || |||| Sbjct 5182 ATCTTGAGGAGCACCATGGAGCTGACCTCCTCGGGGGTGAAGGTCTTGGTCTCGCCGTGG 5123 Query 7838 AAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCT 7897 || || || | | | ||| || || | || || ||||| | | ||| | Sbjct 5122 AACTCCACCTGCACGACGGGGAGGTC-GC--CCTTGGAGACGACCTTGAAGGGCCAGTGC 5066 Query 7898 TTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCA 7957 ||||| ||| ||||||| |||| ||||| | ||||| || ||||| || || Sbjct 5065 TTCATGTCGCTCTGGACCTCGGAGTCCTTGAACTTGCGGCCGATGAGGCGCTTCGCGTCG 5006 Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 || || ||||| | |||||||||||| ||||||||||| ||||| ||||| ||||| Sbjct 5005 AAGACGGTGTTGTGGGGGTTCATGGCAACCTGGTTCTTCGCGGCGTCGCCGATCAGACGC 4946 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 ||| | | || || |||||||| || |||||||| || || || |||||||||||| Sbjct 4945 TCAGAGT---CGGTGAAGGCGACGTAGGAGGGGGTCGTGCGGTTGCCCTGGTCGTTCGCA 4889 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || || || ||||| ||||| ||||| ||||| ||||| || || || || || | ||| Sbjct 4888 ATGATCTCCACGCGCTCGTTCTGCCACACGCCCACGCAGGAGTAGGTCGTGCCCAGATCG 4829 Query 8138 ATACCGATTGC 8148 ||||| || || Sbjct 4828 ATACCAATAGC 4818 >seq1773 Length=4116 Score = 168 bits (186), Expect = 8e-37 Identities = 460/700 (66%), Gaps = 16/700 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| || | ||| || || ||||||||||| ||||| || |||| || Sbjct 930 TCGAAGTCCTCACCGCCGAGGTGGGTGTCGCCCGCGGTCGCCTTGACCTCGAAGACGCCG 871 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | || | ||||| |||||||| || || ||||| || ||||| || Sbjct 870 TTGTCGATCGTGAGCAGGGTCACATCGAACGTACCGCCGCCGAGGTCGAAGATGAGCACA 811 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | | | | | ||||| || | ||||| ||||| || || || || || || Sbjct 810 TTCTTCT-GAC-----TCTTCTTGTCCATGCCGTAGGCGATGGCGGCGGCGGTGGGCTCG 757 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || || ||||| || || | || || || || || || || Sbjct 756 TTGATGATGCGCAGCACGTCGAGGCCGGCGATCACGCCGGCGTCCTTGGTGGCCTGGCGC 697 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || ||||| || | || || |||| || || Sbjct 696 TGGGAGTCGTTGAAGTAGGCGGGGACAGTGACGACGGCCTTGGTCACCTTCTCGCCCAGG 637 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | |||||||| ||| || ||||| || ||||| || | || Sbjct 636 TAGGCCTCGGCGGTCTCTTTCATCTTGACGAGCACCATGGAGCTGATCTCCTCGGGCGAG 577 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG--CAGCACCGG 7874 || || | | | | || || | | | || || ||| | ||| Sbjct 576 AAGGACTTGACCTGCTCCTGGTACTCTACCTGCACGACCGGCTT-GCCGTCCTTCAC--- 521 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 | | ||||| | | ||| | ||||| ||| || | | |||| ||||| | Sbjct 520 -GGTCACCTTGAAGGGCCAGTGCTTCATGTCGCTCTGCAGATCGGGGTCGTCGAACTTCC 462 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 ||||| | ||||| || || || | ||||| | ||||||||| || | ||||||| Sbjct 461 GGCCGATCATGCGCTTCGCGTCGAAGATGGTGTTGTGGGGGTTCATCGCAATCTGGTTCT 402 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 |||| ||||| |||| || || || |||| || || |||||||| || ||||| | Sbjct 401 TCGCGGCGTCGCCGACGAGGCGCTC---CGTTTCGGTGAAGGCGACGTAGGAGGGGGTGG 345 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || ||||||||||| || || || || | ||||| | | || ||||||| Sbjct 344 TACGGTTGCCCTGGTCGTTCGCGATGATCTCCACCTGATCGTTCTTGAACACACCGACGC 285 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGT 8154 | || || || || || | || || ||||| || | ||| Sbjct 284 AGGAGTAGGTGGTGCCCAGGTCGATGCCGATGGCGTTAGT 245 >seq1562 Length=4494 Score = 150 bits (166), Expect = 2e-31 Identities = 240/342 (70%), Gaps = 8/342 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| || | ||| || || || |||||| ||| || |||| || Sbjct 991 TCGAAGTCCTCACCGCCGAGGTGGGTGTCGCCGTTGGTCGCCACGACCTCGAAGAAGCCC 1050 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | | || ||||| |||||||| || || |||||||| | ||| | | Sbjct 1051 TCGTCGATCGTGAGGAGAGACACATCGAACGTACCGCCGCCGAGGTCAAAGACGAGAATG 1110 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | ||||| ||| ||||||||||| || || ||||| || || Sbjct 1111 TTCTTCTCGCCCGCCTTGTT------GAGGCCGTACGCGATGGCGGCAGCCGTCGGCTCG 1164 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | ||| ||| || || ||||| || | || || ||||||| || || Sbjct 1165 TTGATGATGCGCACGAC-GTTAAGCCCGGCAATTGTGCCGGCGTCCTTCGTCGACTGGCG 1223 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 |||| ||||| |||||||| || ||||| || || |||| | | || |||| ||||| Sbjct 1224 CTGCGCGTCGTTGAAGTAGGCGGGCACCGTCACAACGGCGTTCTTTACCTTCTCGCCGAG 1283 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 ||| | || ||||| || ||||| || || |||||||| Sbjct 1284 ATAGGTCTCTGCGATCTCCTTCATCTTCTGGAGCACCATCGA 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635064316805840