Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1671 118 1e-21 >seq1671 Length=4299 Score = 118 bits (130), Expect = 1e-21 Identities = 492/774 (64%), Gaps = 7/774 (1%) Strand=Plus/Minus Query 109691 TGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750 |||| ||| || || | |||||| |||||| || || || || ||| |||| Sbjct 3481 TGAGGTCGGTCACCAGGTACTTGTTCACCACGGGGAACTCGCCGCTCAGCACGCGGCGGA 3422 Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 ||||||||| | ||| |||| ||||| ||||| |||||||| ||||| || | || | Sbjct 3421 CGTAGATGTTGGAGGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTCG 3362 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC--CTTCGTCTTTACCCG 109868 | ||||||||||| || || | ||| || ||| || | || | ||| | || || Sbjct 3361 AGGCTGTGGGCATCGGCGCGAGGAGCAGCGAGTTGCGCATGCCGACCTCGAC--GACGCG 3304 Query 109869 CTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATC 109928 || | |||||||| | | || || || || | | | | ||||| || Sbjct 3303 CTTCTTGAGGGCGTCCCAGTTCCAGCGGCCGCT---CTTCGGCGTCTCGTGCCACAGGTC 3247 Query 109929 TGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAAC 109988 || || |||| | || || ||||||| ||||||||| ||||| || Sbjct 3246 GAACTGGAGCTGGCCCTTTGAGGCGGGGCTGTCCTTGAAGGTCTCGTACGGTCCCTCCAC 3187 Query 109989 CTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGC 110048 | |||||| || || | ||| | || || | || || ||||| || || | | Sbjct 3186 CGCGGCCAGGTCCACGGAGGACTCCACGGCGGCGTAGTAAATGGTCTCGAAGATGTCCTC 3127 Query 110049 ATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCGC 110108 || | | | | ||| | | |||||| || | || || | ||||| Sbjct 3126 GTTGAGCTGCTGCGCCTCCGGGCTGGTGAAGGGCAGGCGGAGCAGGCAGAAGGCGTCCGC 3067 Query 110109 TAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTC 110168 || ||||| || ||||| || | ||||| | |||||| ||| || || ||||| Sbjct 3066 GAGGCCCTGCACGCCGAGGCCGACCGGGCGGTTGCGCATGTTGCTGCGGCGCGCGGTTTC 3007 Query 110169 TACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGAT 110228 |||||||| |||| ||||| ||||| || || || || ||| | |||||| | Sbjct 3006 GACGGGGTAGTAGTTCCGGTCAATGACGCGGTTCAGGTTGAGCGTGATCTCCTTCGTCAC 2947 Query 110229 TTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGC 110288 || | || | || |||||| ||| || | | ||| | |||| | || Sbjct 2946 CTCGTACAGCAGCTGGTGGTCGAACTCGTTCTTCGCGCGGTCCACAAACTTGGACACCGC 2887 Query 110289 AATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGT 110348 || || || || |||||||| | ||||| || |||||| || | ||| || || Sbjct 2886 GATGGAGGCCAGGTTGCACACCGCCGTCTCCTCCGGCGAGGTGTACTCGATAATCTCGGT 2827 Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 |||| |||||| | ||| ||| || | ||||||||| ||||| || |||||| || Sbjct 2826 GCACAGGTTGGAGCACTTGATGGTGCCAAGGTTCTTCTGGTTCGACTTCTCGTTGCAGGC 2767 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462 ||||| || | |||| | || || || || |||| |||| || ||||| Sbjct 2766 GTCCTTGTACAACATGAAGGGCACGCCCGTCTCGATCTGGGACTCGATGATGGC 2713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588912493662800