Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq3593 80.6 9e-11 >seq3593 Length=2243 Score = 80.6 bits (88), Expect = 9e-11 Identities = 122/172 (71%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 24826 AGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATA 24885 ||||||||||| ||| |||||||||||| ||| | |||||||||||||||||| | Sbjct 495 AGCTGAGCTGCATGCTGTACCAGCGCAGCTGCGACATGGGCCTCGGCGTGCCGTTCAACA 436 Query 24886 TCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCG--GACCAGCTCGGACTGAAGGTCGG 24943 |||| |||||| | |||||| || ||||| | ||| ||| || | ||| Sbjct 435 TCGCCTCCTACGCCTTCCTGACCATCCTCATCGCGAAGGCCA--CCGGGCTCCAACCCGG 378 Query 24944 CGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAG 24995 ||| || | ||| |||||||| |||| | || ||||||||| ||| Sbjct 377 CGAGCTCGTGCACACCCTCGGCGACGCCCACGTTTACAAGAACCACGTGGAG 326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164155983164448