Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq3186 190 4e-43 >seq3186 Length=2502 Score = 190 bits (210), Expect = 4e-43 Identities = 748/1148 (65%), Gaps = 74/1148 (6%) Strand=Plus/Minus Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332 ||||| || ||||| | ||| ||||| ||| || | |||||||| || | || ||| Sbjct 2422 CCCTTTACACACAAAATCTGATTGAGAACGGCCACCACCTCCACCAGCTCCCCTTGCGCC 2363 Query 168333 GCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCGTCC 168392 ||| || ||||| |||||| || ||||| || || | |||||| |||| Sbjct 2362 TGCATCACCGCGTCGATGTCCTTGTACGCGGCTGGCGTTTCATCCAGCACGCCCGCGTCT 2303 Query 168393 TTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTTCTTC 168452 ||||||||||| || |||| ||| || | ||||||||| |||| | | | | |||| Sbjct 2302 TTGCGGCACTCTACCCCCTGCGTCGCCGCCACGTGCTCGGCCAGCGTAAAGCGGCGCTTC 2243 Query 168453 GCCGCCGAAC-GC-GACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGTCAG 168510 | | | | || || | ||| || |||||||| ||| |||||| || | | Sbjct 2242 GTCTCGCTTCTGCTGAAGCGCCGC--CCCGCGCCGTGCGAGCAGGAGCAGTAGCTGCTCG 2185 Query 168511 CGTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAATGATGCCGA 168570 ||| |||| | |||||||||||| | ||||||||||| || || || | | ||| Sbjct 2184 CGTTGCCCCTCCCGCGCACGATGTAGCTGCGCGCGCCCATCGACCCGGGGATCACGGCGA 2125 Query 168571 GTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCC-GAAG 168629 | ||| ||| || |||||| ||||||||||||||||| | | |||| || || | Sbjct 2124 GCTCGCCCTGCTTGGCCGACGTCGCGCCCTTGCGGGTCAGCCACACCGCCTCCCCGGACG 2065 Query 168630 TGGCGT--TCCTTG------TTGACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCG- 168680 | |||| || | | |||||||||||||| |||||||| || | | || || Sbjct 2064 TCGCGTCCACCACGAAGCGCTCCACGTAGTTGTGGTGGCAGTTCACGGCGTGCGTGCCGT 2005 Query 168681 -GTC-------TTGA---ACGCCGGCACGAACTCCCGGATCGCCTTGAGCACGCGGACCA 168729 | | ||| | || |||| | |||| ||| | ||| || | ||| Sbjct 2004 CGACGGAGAAGGTGACCGAGGCAGGCAAGGCGCGGCGGACCGCGTCGAGGGCGAGCTCCA 1945 Query 168730 TCATCATGTCGCGGTTCAGGCGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGATGTAGT 168789 |||| | ||| ||| ||| | | |||||||| |||| ||| | ||||| | Sbjct 1944 TCATGACCCGGCGATTCCACATGGCGTACGCCTGCGCCCACTCCACCGCTGCAATGTACT 1885 Query 168790 CGTCGAAA-TCCTGCTCGCCCACTTCGAGCCACGCGAGGTTCTCGT---CCTGCGGGCGC 168845 | ||||| | | |||| | ||| | ||||||| || || | ||| | || Sbjct 1884 C-CCGAAAGTGGGCCGTGCCCTCCGTGAGGTAGGCGAGGTCCTTGTGGGGCAGCGTGTGC 1826 Query 168846 AC-ATGGCGCTTTGCCAGGGCGTTCTTCGCCTTCTCGATGAAGTAGTTGCCGATCACGTT 168904 || | |||| |||| | | |||| || ||||||| || | ||||||| ||| Sbjct 1825 ACGACGGCG----GCCATGTCTTTCTGGGCGAGCTCGATGTAGGTGCTGCCGATGCGGTT 1770 Query 168905 GCCGACGCCGCGCGATCCCGAGTGCAGCATCACCCACACG---TTCGGGTCCGTCGTCCC 168961 ||| | ||| ||||| || ||||||||||||||||||||| ||| || | | Sbjct 1769 GCCAATGCCACGCGAGCCAGAGTGCAGCATCACCCACACGTGCTTCTGGACGG------- 1717 Query 168962 CTGATCGGTCTGGATGCAGATTTCGATGAAGTGGTTGCCGCCACCCAGCGACCCGAGTTG 169021 | ||| | | | ||||| |||||| |||||||| |||| || |||| ||||| || Sbjct 1716 --GGTCGTTGTCCAGGCAGACTTCGATAAAGTGGTTCCCGCTGCCGAGCGTGCCGAGGTG 1659 Query 169022 GGTCACGTTGTTCGACGTCTCCAAGATCGG-ATGCTTTTCGCACAGCTTCTTGAACCGCG 169080 | | | || ||||||| | || | ||| | | || |||||||| || |||| || Sbjct 1658 GTTGATGTGGTTCGACTTACGCAGGTGCGGCACACGGTT-GCACAGCTCCTCAAACC-CG 1601 Query 169081 CCT-CCAGCCCAGAATCGATCCAGGCAC-GCATG-ATAGAGTTCGGGATGCCATGACG-- 169135 || ||||| | | | |||| ||| || || | | | ||| | | | || Sbjct 1600 TCTGCCAGCTCCG---CTTTCCA--CACGGCCTGCACACGCTGCGGCACCTCGTTGCGCC 1546 Query 169136 ACCCGGTTCCTGCCACGAACCCTTCGCGCCCG------GCCCG-CCGTGCGGAACCGCAC 169188 ||||| || | || | | ||||||| | ||| ||||| || | || | Sbjct 1545 ACCCG---CCAACGTCGTTCTCGGAGCGCCCGCTGTGCGTCCGTCCGTGGGGGA-TGCTC 1490 Query 169189 G-TTCGATCGCCGAACGCATCGCCGCCAAGTTGTCCGGCAGTTGCGAAGCAGTCAGCGTG 169247 | |||||| ||| ||||| | ||| | |||||| ||| | | |||||| Sbjct 1489 GCCTCGATCTCCGTCCGCATGTTCTCCAGCGAGCTCGGCAGCTGCTACGGCACCAGCGTC 1430 Query 169248 GTGCGCACAGCCATCATGCCGCAGCCGATGTCGACGCCGACCGCGTACGGGATCACCGCA 169307 || |||||||| ||| ||||| ||||||||||||||||| | ||||| | || Sbjct 1429 GTCTTCACAGCCACCATCCCGCACCCGATGTCGACGCCGACGCTGGCGGGGATGAGGGCG 1370 Query 169308 TCCTTGGTCGGGATCACCGAACCAACGGCTGCGCCGTA-CCCGGCGTGGACGTCGGGCAT 169366 | | || |||||||||| || || | ||| || | ||| |||||||||||||||| Sbjct 1369 CCGCTCGTGGGGATCACCGTCCCGACCG-TGCACCCAATACCGCCGTGGACGTCGGGCAT 1311 Query 169367 CACCGCGA 169374 | ||||| Sbjct 1310 GATCGCGA 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895669813987920