Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq3186 201 2e-46 >seq3186 Length=2502 Score = 201 bits (222), Expect = 2e-46 Identities = 455/676 (67%), Gaps = 40/676 (6%) Strand=Plus/Minus Query 137304 TTTCGTCGATCACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGT 137363 |||| || | |||||| ||||| ||||||||||| || |||| || ||| | || | Sbjct 2325 TTTCATCCAGCACGCCCGCGTCTTTGCGGCACTCTACCCCCTGCGTCGCCGCCACGTGCT 2266 Query 137364 CCTCCAGAGTGAAG-GTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGC 137422 | |||| || ||| | ||| | | | | || || | || ||| |||||||||||| Sbjct 2265 CGGCCAGCGTAAAGCGGCGCTTCGTCTCGCTTCTGCTGAAGCG-CCGCCCCGCGCCGTGC 2207 Query 137423 GAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCC 137482 ||||| |||||| | | ||| |||||| | ||||||||||||||| || ||| Sbjct 2206 GAGCAGGAGCAGTAGCTGCTCGCGTTGCCCCTCCCGCGCACGATGTAGCTGCGCGCGCCC 2147 Query 137483 ATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTC 137542 ||||| |||||||| | ||| || | ||| || |||||| |||||||||||||||| Sbjct 2146 ATCGACCCGGGGATCACGGCGAGCTCGCCCTGCTTGGCCGACGTCGCGCCCTTGCGGGTC 2087 Query 137543 ACGAAGACCCACTCGTC-GAAGTGGAATTC--------CTTCTGGACGTAGTTGTGGTGG 137593 | | ||| ||| | || || | | | || ||||||||||||||| Sbjct 2086 AGCCACACCGCCTCCCCGGACGTCGCGTCCACCACGAAGCGCTCCACGTAGTTGTGGTGG 2027 Query 137594 CAGTTCACCGCTTCCTTGTCCGTC--TTGA-------ACGGCGGCAGGCCCGACGC-CCG 137643 |||||||| || | | || ||||| || || | ||||||| | ||| || Sbjct 2026 CAGTTCACGGCGTGCGTG-CCGTCGACGGAGAAGGTGACCGAGGCAGGCAAGGCGCGGCG 1968 Query 137644 CATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCC 137703 | || || ||| | | ||||||| | | ||| || | ||| | |||| | Sbjct 1967 GACCGCGTCGAGGGCGAGCTCCATCATGACCCGGCGATTCCACATGGCGTACGCCTGCGC 1908 Query 137704 CCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAG 137763 ||| | || ||| | | ||| || | || | | | ||| || ||| | || || Sbjct 1907 CCACTCCACCGCTGCAATGTACTCCCGAAAGTGGGCCGTGCCCTCCGTGAGGTAGGCGAG 1848 Query 137764 GTCCTTGTCCAGCGGCTTGCGCCCGTCACGGCGCAGCATCATCTC---CTTGGCCTTCTC 137820 |||||||| || || || || || |||||| || ||| || || ||| ||| Sbjct 1847 GTCCTTGTGGGGCAGCGTGTGCACG--ACGGCG--GC--CATGTCTTTCTGGGCGAGCTC 1794 Query 137821 GATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCA 137880 |||| || ||| ||||||| |||||| | ||| |||||||| ||||| ||||||||||| Sbjct 1793 GATGTAGGTGCTGCCGATGCGGTTGCCAATGCCACGCGAGCCAGAGTGCAGCATCACCCA 1734 Query 137881 GACGCGCT---------GATCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCC 137931 ||| ||| | || | ||| |||||||| ||||| |||||||| |||| ||| Sbjct 1733 CACGTGCTTCTGGACGGGGTCGTTGTCCAGGCAGACTTCGATAAAGTGGTTCCCGCTGCC 1674 Query 137932 CAGGGTGCCCAGTTGG 137947 || ||||| || ||| Sbjct 1673 GAGCGTGCCGAGGTGG 1658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709645074268480