Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq3186 201 2e-46 >seq3186 Length=2502 Score = 201 bits (222), Expect = 2e-46 Identities = 449/666 (67%), Gaps = 40/666 (6%) Strand=Plus/Minus Query 136078 CACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGT 136137 |||||| ||||| ||||||||||| || |||| || ||| | || || |||| || Sbjct 2315 CACGCCCGCGTCTTTGCGGCACTCTACCCCCTGCGTCGCCGCCACGTGCTCGGCCAGCGT 2256 Query 136138 GAAG-GTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGC 136196 ||| | ||| | | | | || || | || ||| ||||||||||||||||| |||| Sbjct 2255 AAAGCGGCGCTTCGTCTCGCTTCTGCTGAAGCG-CCGCCCCGCGCCGTGCGAGCAGGAGC 2197 Query 136197 AGAACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGG 136256 || | | |||||||||| | ||||||||||||||| || |||||||| |||| Sbjct 2196 AGTAGCTGCTCGCGTTGCCCCTCCCGCGCACGATGTAGCTGCGCGCGCCCATCGACCCGG 2137 Query 136257 GGATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCC 136316 |||| | ||| || | ||| || |||||| ||||||||||||||||| | ||| Sbjct 2136 GGATCACGGCGAGCTCGCCCTGCTTGGCCGACGTCGCGCCCTTGCGGGTCAGCCACACCG 2077 Query 136317 ACTCGTC-GAAGTGGAATTC--------CTTCTGGACGTAGTTGTGGTGGCAGTTCACCG 136367 ||| | || || | | | || ||||||||||||||||||||||| | Sbjct 2076 CCTCCCCGGACGTCGCGTCCACCACGAAGCGCTCCACGTAGTTGTGGTGGCAGTTCACGG 2017 Query 136368 CTTCCTTGTCCGTC--TTGA-------ACGGCGGCAGGCCCGACGC-TCGCATGGCCTCC 136417 | | | || ||||| || || | ||||||| | ||| || | || || Sbjct 2016 CGTGCGTG-CCGTCGACGGAGAAGGTGACCGAGGCAGGCAAGGCGCGGCGGACCGCGTCG 1958 Query 136418 AGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACG 136477 ||| | | ||||||| | | ||| || | ||| | |||| |||| | || Sbjct 1957 AGGGCGAGCTCCATCATGACCCGGCGATTCCACATGGCGTACGCCTGCGCCCACTCCACC 1898 Query 136478 GCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCC 136537 ||| | | ||| || | || | | | ||| || ||| | || |||||||||| Sbjct 1897 GCTGCAATGTACTCCCGAAAGTGGGCCGTGCCCTCCGTGAGGTAGGCGAGGTCCTTGTGG 1838 Query 136538 AGCGGCTTACGCCCGTCACGGCGCAGCATCATCTC---CTTGGCCTTCTCGATGAAGATG 136594 || || | || || |||||| || ||| || || ||| ||||||| || || Sbjct 1837 GGCAGCGTGTGCACG--ACGGCG--GC--CATGTCTTTCTGGGCGAGCTCGATGTAGGTG 1784 Query 136595 CGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCT-- 136652 | ||||||| |||||| | ||| |||||||| ||||| ||||||||||| ||| ||| Sbjct 1783 CTGCCGATGCGGTTGCCAATGCCACGCGAGCCAGAGTGCAGCATCACCCACACGTGCTTC 1724 Query 136653 -------GGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCC 136705 |||| | ||| |||||||| ||||| |||||||| |||| ||| || ||||| Sbjct 1723 TGGACGGGGTCGTTGTCCAGGCAGACTTCGATAAAGTGGTTCCCGCTGCCGAGCGTGCCG 1664 Query 136706 AGTTGG 136711 || ||| Sbjct 1663 AGGTGG 1658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701287575512960