Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1671 86.0 2e-11 >seq1671 Length=4299 Score = 86.0 bits (94), Expect = 2e-11 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || ||||| || || ||||| ||||||| | || | |||| || | |||||| Sbjct 2885 ATGGAGGCCAGGTTGCACACCGCCGTCTCCTCCGGCGAGG-TGTACTCGATAATCTCGGT 2827 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||||||| || | |||||||||||| | ||||||||||| || || ||| || || Sbjct 2826 GCACAGGTTGGAGCACTTGATGGTGCCAAGGTTCTTCTGGTTCGACTTCTCGTTGCAGGC 2767 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 |||||||| | ||| | || || ||||| ||||| Sbjct 2766 GTCCTTGTACAACATGAAGGGCACGCCCGTCTCGATCTG 2728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471654933798962