Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2387 116 3e-21 seq8454 114 1e-20 seq6152 114 1e-20 seq990 109 5e-19 seq5997 105 6e-18 seq70 104 2e-17 >seq2387 Length=3272 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || || | | Sbjct 106 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 165 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 166 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 225 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 226 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 285 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || ||| ||||| |||| ||||||| || Sbjct 286 ATCCAAAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 332 >seq8454 Length=528 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || || | | Sbjct 74 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 133 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 134 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 193 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 194 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 253 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| ||||| |||| ||||||| ||| Sbjct 254 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 301 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || || | | Sbjct 302 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 361 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 362 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 421 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 422 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 481 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| ||||| |||| ||||||| || Sbjct 482 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 528 >seq6152 Length=1087 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || || | | Sbjct 816 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 875 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 876 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 935 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 936 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 995 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| ||||| |||| ||||||| ||| Sbjct 996 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGGC 1043 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || || | | Sbjct 25 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 84 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 85 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 144 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 145 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 204 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| ||||| |||| ||||||| || Sbjct 205 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 251 >seq990 Length=6061 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || ||||| ||||| || || || | ||||| || || || | Sbjct 489 GATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCCCTCGAGGTCGAGGCGAG 548 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 549 CGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 608 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| ||||| || ||||||||||| | | | | || || || Sbjct 609 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACACTCGCGGACTACAA 668 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || ||| | ||| |||| ||||||| || Sbjct 669 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCGCCTGCGCGGCGG 716 >seq5997 Length=1133 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || ||||| ||||| || || || | ||||| || || || | Sbjct 367 GATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCCCTCGAGGTCGAGGCGAG 426 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 427 CGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 486 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| ||||| || ||||||||||| | | | | || || || Sbjct 487 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 546 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || ||||| ||||| || ||| | ||| |||| | ||||| || Sbjct 547 CATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCGCCTCCGCGGCGG 594 >seq70 Length=16190 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || |||| || || || || | | Sbjct 15974 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 16033 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 16034 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 16093 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||||||||| | | | | || || ||| Sbjct 16094 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAAC 16153 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| ||||| || ||| ||||| |||| Sbjct 16154 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 16188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449849089791280