Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq3186 95.1 3e-15 >seq3186 Length=2502 Score = 95.1 bits (104), Expect = 3e-15 Identities = 184/269 (68%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 37202 AGGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCA 37261 ||||||| || | | | ||||| || |||||||| ||| | |||||| ||||| | Sbjct 2116 AGGGCGAGCTCGCCGTGATCCCCGGGTCGATGGGCGCGCGCAGCTACATCGTGCGCGGGA 2175 Query 37262 AGGGAAATTCC-GAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGG 37320 ||| || | | | | | |||||| ||| ||||| || || || | ||| | Sbjct 2176 GGGGCAACGCGAGCAGC-TACTGCTCCTGCTCGCACGGCGCGGGGCGGCGCTTCAGCAGA 2234 Query 37321 GCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAG 37380 ||| | || ||||| || || | | || || | |||||| || | || | ||| Sbjct 2235 AGCGAGACGAAGCGCCGCTTTACGCTGGCCGAGCACGTGGCGGCGACGCAGGGGGTAGAG 2294 Query 37381 TGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCG 37440 ||||||||||| || | ||| | || || |||||||| || |||||||||||||| ||| Sbjct 2295 TGCCGCAAAGACGCGGGCGTGCTGGATGAAACGCCAGCCGCGTACAAGGACATCGACGCG 2354 Query 37441 GTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 || ||| |||||| | |||||||| Sbjct 2355 GTGATGCAGGCGCAAGGGGAGCTGGTGGA 2383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139268932699512