Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2387 95.1 8e-15 seq6152 89.7 3e-13 seq70 89.7 3e-13 seq8454 86.0 4e-12 seq990 82.4 5e-11 >seq2387 Length=3272 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || | || || | ||||| || || || ||| ||||| |||||||| || | Sbjct 333 ACCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCCGC 274 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || |||| || || ||||| || |||| |||||||| || |||| Sbjct 273 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGG 214 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || ||| |||| | | || | |||||||| | |||| Sbjct 213 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCTCCA 155 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAG 33751 | || | || |||||| || || || | ||| || || ||||||||||||| Sbjct 154 CCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATAG 104 >seq6152 Length=1087 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || || ||| || || |||||||| || | ||| ||||| | || || Sbjct 1025 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 966 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 965 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 906 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 905 GATCTTCGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATCGTCT 847 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAG 33751 | || || | ||| || || ||||||||||||| Sbjct 846 TGCCGGTCAGCGTCTTCACGAAGATCTGCATAG 814 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || ||| || | || || | ||||| || || || ||| || || |||||||| || Sbjct 255 GTTACCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 196 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 | ||| ||||| | || |||| || || ||||| || |||| |||||||| || | Sbjct 195 CGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGG 136 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATT 33697 ||| | || || ||||| || ||| |||| | | || | |||||||| | | Sbjct 135 CGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCT 77 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || | || |||||| || || || | ||| || || ||||||||||| Sbjct 76 CCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 25 >seq70 Length=16190 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || || ||| || || |||||||| || | ||| ||||| | || || Sbjct 16183 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 16124 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 16123 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 16064 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 16063 GATCTTCGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATCGTCT 16005 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATAG 33751 | || || | ||| || || ||||||||||||| Sbjct 16004 TGCCGGTCAGCGTCTTCACGAAGATCTGCATAG 15972 >seq8454 Length=528 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || || ||| || || |||||||| || | ||| ||||| | || || Sbjct 283 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 224 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 223 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 164 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 163 GATCTTCGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATCGTCT 105 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||| || || ||||||||||| Sbjct 104 TGCCGGTCAGCGTCTTCACGAAGATCTGCAT 74 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || || ||| || || |||||||| || | ||| ||||| | || || Sbjct 511 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 452 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 451 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 392 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| |||| | | || | |||||||| | ||||| || | || |||||| | Sbjct 391 GATCTTCGCCTTCA-CGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATCGTCT 333 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||| || || ||||||||||| Sbjct 332 TGCCGGTCAGCGTCTTCACGAAGATCTGCAT 302 >seq990 Length=6061 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| || | ||||||||| | || |||| || || ||||| || Sbjct 681 CTCCTTCTGGATGTTGTAGTCCGCGAGTGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAA 622 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| |||||||| || |||| | || || ||||| || ||| |||| | | Sbjct 621 GATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 563 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | |||||||| | || || || | | |||||| || || || | ||| || | Sbjct 562 TCTCGATCGTGTCGCTCGCCTCGACCTCGAGGGCGATCGTCTTGCCGGTCAGCGTCTTCA 503 Query 33737 CAAAGATCTGCATAGTTGGTGTGTTT 33762 | ||||||||||| | |||||||| Sbjct 502 CGAAGATCTGCAT--CTTGTGTGTTT 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328669443553920