Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3593 185 1e-41 >seq3593 Length=2243 Score = 185 bits (204), Expect = 1e-41 Identities = 403/596 (68%), Gaps = 18/596 (3%) Strand=Plus/Plus Query 146925 CTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTT 146984 |||||||||||| ||| ||||| ||||| || ||||||||||| | || || || | Sbjct 326 CTCCACGTGGTTCTTGTAAACGTGGGCGTCGCCGAGGGTGTGCACGAGCTCGCCGGGTTG 385 Query 146985 AAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGG 147044 || ||||| | | || | | | ||| || | | |||| ||| |||||||| || Sbjct 386 GAGCCCGGTGGCCTTCGCGATGAGGATGGTCAGGAAGGCGTAGGAGGCGATGTTGAACGG 445 Query 147045 GACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC-CCGT--- 147100 || || ||||||||||| | | |||||||||| ||| |||||| ||| Sbjct 446 CACGCCGAGGCCCATGTCGCAGCTGCGCTGGTACAGCATGCAGCTCAGCTCCTGCGTGTT 505 Query 147101 --CGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 | |||||| ||||| | |||| |||||||||||| |||||||| | ||| | Sbjct 506 TGTGTTCACGTAGAACTGCCCGAGGAGGTGGCACGGCGGGAGCGCCATCTTGTCCAGCGC 565 Query 147159 CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTC 147218 ||||||||||| || | || | ||||| | | | |||||| | | | || Sbjct 566 GGCGGGGTTCCACGCGGTGAAGAGGAGCCGGCGGTCGTTCGGGTTCGACCGCAGCGTCTC 625 Query 147219 GATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTC---CAC 147275 || | | | | | |||||| ||||| | ||| |||||| || ||| | | Sbjct 626 GACGATGCGCTTGATCTGGTCGACGCCTTTGCCATCGTAGT---TCTCGCGGGCGGAGGT 682 Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTC--GCCGGGC 147333 |||| ||| || ||||| | |||||||||||||||||| || || ||||| | ||| Sbjct 683 GTACTCGGCTCCGAAGTGGCGCCACTGGAAGCCGTACACGGGGCCGAGGTCCATCTCGGC 742 Query 147334 TTTCTGTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 || | | ||| ||| || | | | |||||| || || |||| | |||||||||| Sbjct 743 GTTTTCGGTGAG--GCCGCGGCTG-TCGAGAAAGGCGCGGCTGCCGTTGTCGTCCCAGAT 799 Query 147393 GCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAG 147452 | ||| ||| | ||| |||| ||| | ||| || ||| || | ||||| | || Sbjct 800 GTGCACGCCCGCGTCGGCGAGCAGCTTCGCGTCGGTCTCGCCGCGCAGAAACCAAATGAG 859 Query 147453 CTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTGGT 147508 |||||| | ||||| | ||| ||||| | ||| || |||||||| || | ||||| Sbjct 860 CTCCTCGGAGACCCCTCGCCAGAAGACGCGCTTCGTCGTCAGCAGCGGCAGCTGGT 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583425085406400