Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4029 118 1e-21 seq5997 111 2e-19 seq990 105 7e-18 seq2387 100 3e-16 seq1671 98.7 1e-15 seq8454 96.9 4e-15 seq6152 96.9 4e-15 seq70 95.1 1e-14 >seq4029 Length=1979 Score = 118 bits (130), Expect = 1e-21 Identities = 215/310 (69%), Gaps = 10/310 (3%) Strand=Plus/Minus Query 21544 CGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATCG 21603 || || || ||||| || ||||| || | |||| ||| |||||||| | |||| Sbjct 1340 CGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGGCGTTCATGCCGATCAGACGC 1281 Query 21604 ACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCATGGCG 21663 ||||| ||||| ||| || |||||||||||||| | || || || |||| |||||| Sbjct 1280 ACCGGCAGCGCGTCGCAGATGAACTCCTTCTCGATGACGACGGCGTCGGTGATGATGGCG 1221 Query 21664 TGTATTTCACCG-GCGGACAATTTGTCTTGAGGCTCGATGTATTTGTTGTAGTAGAGACA 21722 | | || |||| | |||| ||| ||||| |||||||| || || Sbjct 1220 AGCACGCGGTCGCGCGGG-AGCTTGT------GCTTGATGTGGCTGTTGTAGAGCAGGCA 1168 Query 21723 AGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGACC 21782 || || | |||||||| |||||||||||||| || | ||||||||||| ||||| || Sbjct 1167 GGCGAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTGAAGGTGAGGCC 1108 Query 21783 GGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCA-AAGCTACCGGaaaaaaaCA 21841 |||||| | || || || || | | | || || |||| ||| ||||| || || | Sbjct 1107 GGGCATCACGCCGCGCTTCTTGA-GCCAGAAGATGGCGCAGAAGGAGCCGGAGAAGAAGA 1049 Query 21842 CGCCCTCCAC 21851 |||||| || Sbjct 1048 TGCCCTCGAC 1039 >seq5997 Length=1133 Score = 111 bits (122), Expect = 2e-19 Identities = 168/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| ||||||||| ||||| || ||||| || ||||||||||| | Sbjct 594 CCGCCGCGGAGGCGCAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 535 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| || || |||| |||||||| || ||||| Sbjct 534 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 475 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || || | |||||| || || || Sbjct 474 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCGACC 415 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725 ||||| | || || || ||||| | || || ||||| || ||||| |||| | |||| Sbjct 414 TCGAGGGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATCTTGTGTGTGTT 356 >seq990 Length=6061 Score = 105 bits (116), Expect = 7e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 707 AGGCGCAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGTGTGCGG 648 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 647 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 588 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || || || ||||| | Sbjct 587 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCGACCTCGAGGGCG 528 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 || || || ||||| | || || ||||| || ||||| |||| Sbjct 527 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATCTTGT 485 >seq2387 Length=3272 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || |||||||| ||||||||||| | | ||| | Sbjct 323 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTTTGGATGTTGTAGTCCGCGAGCGTGCGG 264 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 263 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 204 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 203 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCG 144 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 143 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 106 >seq1671 Length=4299 Score = 98.7 bits (108), Expect = 1e-15 Identities = 240/358 (67%), Gaps = 13/358 (4%) Strand=Plus/Plus Query 7735 GAAGACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATAC 7794 || |||||||| || ||||| ||| ||||||| || || || || ||| | Sbjct 2212 GACGACAGCATTGAGGGCATCTACGACACGCTCAAGGAGTGTGCGGTGATCAGCAAGGCC 2271 Query 7795 GGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCC 7854 | |||||| || || | |||| || || | |||||| ||| ||| ||| | | Sbjct 2272 GCCGGCGGCATCGGCATCCACGTGCACAACATCCGCGCCGCCGGCAGCTACATTGCCGGC 2331 Query 7855 ACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGA 7914 |||||||| | ||| ||| | ||| ||| | ||||||| || ||| ||| || Sbjct 2332 ACCAACGGCACGTCCAACGGCCTCATGCCGATGATCCGCGTGTGGAACAACACGGCCCGC 2391 Query 7915 CATGTAGACCAGGGGGGA---AAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGG 7971 | || |||||||| || |||||||| |||||| || || || | ||||||||| Sbjct 2392 TACGTCGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCGATGTACCTCGAGCCGTGG 2451 Query 7972 CACGCGGACATTTACGCAG----TGCTAAATCTGCGTCGCAACATGGGTTGCGAAGA-CA 8026 ||||| ||| | | || || |||| | || ||||||| ||| || || || Sbjct 2452 CACGCCGACGTCTTCG-AGTTCCTGCTGA---TGAAGCGCAACACGGGCAAGGACGACCA 2507 Query 8027 GCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGT 8084 || |||||||| || |||| || ||||| | ||||| || || |||| |||||| Sbjct 2508 GC-GCGCGCGCGACCTCTTCTACGCCCTGTGGATCCCCGACCTCTTCATGAAGCGCGT 2564 >seq8454 Length=528 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 291 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 232 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 231 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 172 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 171 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCG 112 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 111 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 74 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 519 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 460 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 459 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 400 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 399 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCG 340 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 339 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 302 >seq6152 Length=1087 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 242 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 183 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 182 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 123 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 122 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCG 63 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 62 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 25 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 1033 AGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGG 974 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || Sbjct 973 CCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 914 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || | |||||| || ||||| || || | Sbjct 913 TTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCG 854 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || || ||||| || ||||| Sbjct 853 ATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 816 >seq70 Length=16190 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| ||| ||||| ||||| || ||||| || ||||||||||| | | ||| | Sbjct 16188 CGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCC 16129 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||| ||||| || || |||| |||||||| || ||||| ||||| || || Sbjct 16128 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTG 16069 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || || || || | |||||| || ||||| || || | || Sbjct 16068 TCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATC 16009 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| | || || ||||| || ||||| Sbjct 16008 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 15974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505343905417520