Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20oncopelti_20[genbank_20GCA_5F000482165.1_202013-10-25] 8,626 sequences; 24,962,918 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq226 82.4 6e-11 >seq226 Length=11248 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/149 (74%), Gaps = 12/149 (8%) Strand=Plus/Plus Query 53531 ATGGGCGACAAGTT-TGCATCCTTCACGGCGCAAAAGGGGACATGCGGAGCGG--TCCTG 53587 || ||||||||||| |||| || ||||| ||||||||| || || ||| ||| | Sbjct 10019 ATTGGCGACAAGTTCTGCAGCCGGCACGG-GCAAAAGGGTAC-----GAACGGCATCCAG 10072 Query 53588 ACTC---AGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAAC 53644 || |||| ||| |||||||| || ||||| | || || ||||| ||||||||| Sbjct 10073 TTTCGGCAGGAAGACCTGCCCTTCAACCGCGACGGCATCGTCCCGGACCTGATCATCAAC 10132 Query 53645 CCCCACGCCTTTCCCTCCAGGATGACGGT 53673 || |||||| | || ||| ||||||| || Sbjct 10133 CCGCACGCCATCCCGTCCCGGATGACCGT 10161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406120500316636